RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 RPL17P18621 184 aaKnown RBP19.83■□□□□ 0.77
CCDC78-206ENST00000463539 MCM3P25205 808 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 GPR15P49685 360 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 ATXN1P54253 815 aaKnown RBP19.83■□□□□ 0.77
CCDC78-206ENST00000463539 ROR1Q01973 937 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 DSG1Q02413 1049 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 CYP1B1Q16678 543 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 MGAT5BQ3V5L5 792 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 SDHAF4Q5VUM1 108 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 KAZNQ674X7 775 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 WDR93Q6P2C0 686 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 MAATS1Q7Z4T9 603 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 DDX53Q86TM3 631 aaKnown RBP19.83■□□□□ 0.77
CCDC78-206ENST00000463539 NUP93Q8N1F7 819 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 FIBCD1Q8N539 461 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 RUBCNQ92622 972 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.83■□□□□ 0.77
CCDC78-206ENST00000463539 DMGDHQ9UI17 866 aaKnown RBP19.83■□□□□ 0.77
CCDC78-206ENST00000463539 SLC27A5Q9Y2P5 690 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 INSL6Q9Y581 213 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 PCDHB12Q9Y5F1 795 aa19.83■□□□□ 0.77
CCDC78-206ENST00000463539 WDR27A2RRH5 827 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 M0QYT0 321 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 MDM4O15151 490 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 ADAM12O43184 909 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 OR1D2P34982 312 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 RDXP35241 583 aaKnown RBP19.83■□□□□ 0.76
CCDC78-206ENST00000463539 VSNL1P62760 191 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 OTUD1Q5VV17 481 aaPredicted RBP19.83■□□□□ 0.76
CCDC78-206ENST00000463539 BSPRYQ5W0U4 402 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 C12orf50Q8NA57 414 aaPredicted RBP19.83■□□□□ 0.76
CCDC78-206ENST00000463539 SLC7A14Q8TBB6 771 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 EDEM1Q92611 657 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 SNRNP25Q9BV90 132 aaKnown RBP19.83■□□□□ 0.76
CCDC78-206ENST00000463539 CALN1Q9BXU9 219 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 RRN3Q9NYV6 651 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 CALCOCO1Q9P1Z2 691 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 SLC4A7Q9Y6M7 1214 aa19.83■□□□□ 0.76
CCDC78-206ENST00000463539 ALPK3Q96L96 1907 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 ZMYND10O75800 440 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 ENDOD1O94919 500 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 HEXIM1O94992 359 aaKnown RBP19.82■□□□□ 0.76
CCDC78-206ENST00000463539 VNN2O95498 520 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 URODP06132 367 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 CD48P09326 243 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 CDH6P55285 790 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 PITX1P78337 314 aaPredicted RBP19.82■□□□□ 0.76
CCDC78-206ENST00000463539 KRT81Q14533 505 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 BNIPLQ7Z465 357 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 HERC6Q8IVU3 1022 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 HERVK_113Q902F9 699 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 SLC9A7Q96T83 725 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 CRISPLD1Q9H336 500 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 FBXO44Q9H4M3 255 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 PLEKHA4Q9H4M7 779 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 ZMYND8Q9ULU4 1186 aaPredicted RBP19.82■□□□□ 0.76
CCDC78-206ENST00000463539 EFR3BQ9Y2G0 817 aa19.82■□□□□ 0.76
CCDC78-206ENST00000463539 PTPRDP23468 1912 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 SYNJ2BP-COX16A0A087WUM0 186 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 SOAT2O75908 522 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 HAPLN1P10915 354 aaPredicted RBP19.81■□□□□ 0.76
CCDC78-206ENST00000463539 FNTAP49354 379 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 YWHAGP61981 247 aaKnown RBP eCLIP19.81■□□□□ 0.76
CCDC78-206ENST00000463539 DR1Q01658 176 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 DEUP1Q05D60 604 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 DUSP4Q13115 394 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 NME3Q13232 169 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 DHX34Q14147 1143 aaKnown RBP19.81■□□□□ 0.76
CCDC78-206ENST00000463539 TAZQ16635 292 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 ERMARDQ5T6L9 678 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 CCDC137Q6PK04 289 aaKnown RBP19.81■□□□□ 0.76
CCDC78-206ENST00000463539 FAM131BQ86XD5 332 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 MAP7D3Q8IWC1 876 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 C1orf54Q8WWF1 131 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 RUNDC3BQ96NL0 473 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 LBHD1Q9BQE6 289 aaPredicted RBP19.81■□□□□ 0.76
CCDC78-206ENST00000463539 LRRC19Q9H756 370 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 HOMER3Q9NSC5 361 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 GPATCH2LQ9NWQ4 482 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 COX16Q9P0S2 106 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 STK39Q9UEW8 545 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 RPL10AP62906 217 aaKnown RBP19.81■□□□□ 0.76
CCDC78-206ENST00000463539 KRT17Q04695 432 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 ADCY2Q08462 1091 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 BRD3Q15059 726 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 PDK2Q15119 407 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 ZC3H12AQ5D1E8 599 aaKnown RBP19.81■□□□□ 0.76
CCDC78-206ENST00000463539 TTC27Q6P3X3 843 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 DENND5BQ6ZUT9 1274 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 BEND5Q7L4P6 421 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 VPS52Q8N1B4 723 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 STKLD1Q8NE28 680 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 ADAM32Q8TC27 787 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 ATG4AQ8WYN0 398 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 HINFPQ9BQA5 517 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 CLSTN3Q9BQT9 956 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 FAM204AQ9H8W3 233 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 PCYOX1Q9UHG3 505 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 SCML2Q9UQR0 700 aa19.81■□□□□ 0.76
CCDC78-206ENST00000463539 R3HDM2Q9Y2K5 976 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms