RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 IRF1P10914 325 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 CEACAM1P13688 526 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 CSRP1P21291 193 aaKnown RBP24.56■■□□□ 1.52
SSNA1-203ENST00000463511 MAP7D1Q3KQU3 841 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 BTBD8Q5XKL5 378 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 UNQ6494/PRO21346Q6UXR6 183 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 ETFBKMTQ8IXQ9 262 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 PLEKHO2Q8TD55 490 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 SMARCD1Q96GM5 515 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 CLSTN2Q9H4D0 955 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 KRT82Q9NSB4 513 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 TMEM74BQ9NUR3 256 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 GMIPQ9P107 970 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 RALYQ9UKM9 306 aaKnown RBP24.56■■□□□ 1.52
SSNA1-203ENST00000463511 WASF3Q9UPY6 502 aa24.56■■□□□ 1.52
SSNA1-203ENST00000463511 TBC1D3BA6NDS4 549 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 EXOC3O60645 756 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 TULP3O75386 442 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 MAPK8P45983 427 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 LMAN2Q12907 356 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 BMT2Q1RMZ1 405 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 ANO4Q32M45 955 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 ZNF667Q5HYK9 610 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 SNX30Q5VWJ9 437 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 SYT12Q8IV01 421 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 C12orf56Q8IXR9 622 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 ZNF513Q8N8E2 541 aaPredicted RBP24.55■■□□□ 1.52
SSNA1-203ENST00000463511 DEFB124Q8NES8 71 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 WBP2Q969T9 261 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 TNIP3Q96KP6 325 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 NUSAP1Q9BXS6 441 aaKnown RBP24.55■■□□□ 1.52
SSNA1-203ENST00000463511 SDCBP2Q9H190 292 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 VRTNQ9H8Y1 702 aa24.55■■□□□ 1.52
SSNA1-203ENST00000463511 CGNQ9P2M7 1197 aaKnown RBP24.55■■□□□ 1.52
SSNA1-203ENST00000463511 PCDH15Q96QU1 1955 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 ZZEF1O43149 2961 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 HOXC11O43248 304 aaPredicted RBP24.54■■□□□ 1.52
SSNA1-203ENST00000463511 AP1G2O75843 785 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 TOP3BO95985 862 aaKnown RBP24.54■■□□□ 1.52
SSNA1-203ENST00000463511 TUBP50607 506 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 KNOP1Q1ED39 458 aaKnown RBP24.54■■□□□ 1.52
SSNA1-203ENST00000463511 C10orf76Q5T2E6 689 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 LYSMD4Q5XG99 296 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 FUKQ8N0W3 1084 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 NACA2Q9H009 215 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 SPHK2Q9NRA0 654 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 RMND1Q9NWS8 449 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 IL37Q9NZH6 218 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 DEC1Q9P2X7 70 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 MAN1B1Q9UKM7 699 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 FAM208BQ5VWN6 2430 aa24.54■■□□□ 1.52
SSNA1-203ENST00000463511 CACNA1EQ15878 2313 aa24.53■■□□□ 1.52
SSNA1-203ENST00000463511 LRRIQ3A6PVS8 624 aaPredicted RBP24.53■■□□□ 1.52
SSNA1-203ENST00000463511 ZDHHC11BP0C7U3 371 aa24.53■■□□□ 1.52
SSNA1-203ENST00000463511 CCDC130P13994 396 aa24.53■■□□□ 1.52
SSNA1-203ENST00000463511 ENGP17813 658 aa24.53■■□□□ 1.52
SSNA1-203ENST00000463511 ORC1Q13415 861 aa24.53■■□□□ 1.52
SSNA1-203ENST00000463511 NCOA4Q13772 614 aa24.53■■□□□ 1.52
SSNA1-203ENST00000463511 BYSLQ13895 437 aaKnown RBP24.53■■□□□ 1.52
SSNA1-203ENST00000463511 ACOT1Q86TX2 421 aa24.53■■□□□ 1.52
SSNA1-203ENST00000463511 TMEM25Q86YD3 366 aa24.53■■□□□ 1.52
SSNA1-203ENST00000463511 TERB1Q8NA31 727 aa24.53■■□□□ 1.52
SSNA1-203ENST00000463511 TRIM24O15164 1050 aa24.52■■□□□ 1.52
SSNA1-203ENST00000463511 MBD3O95983 291 aa24.52■■□□□ 1.52
SSNA1-203ENST00000463511 ITPKAP23677 461 aa24.52■■□□□ 1.52
SSNA1-203ENST00000463511 PGFP49763 221 aa24.52■■□□□ 1.52
SSNA1-203ENST00000463511 ZNF658Q5TYW1 1059 aaPredicted RBP24.52■■□□□ 1.52
SSNA1-203ENST00000463511 TRMT11Q7Z4G4 463 aaKnown RBP24.52■■□□□ 1.52
SSNA1-203ENST00000463511 PARD3BQ8TEW8 1205 aa24.52■■□□□ 1.52
SSNA1-203ENST00000463511 ADAM33Q9BZ11 813 aa24.52■■□□□ 1.52
SSNA1-203ENST00000463511 NUP62CLQ9H1M0 184 aa24.52■■□□□ 1.52
SSNA1-203ENST00000463511 KIAA1468Q9P260 1216 aa24.52■■□□□ 1.52
SSNA1-203ENST00000463511 SPEGQ15772 3267 aa24.52■■□□□ 1.51
SSNA1-203ENST00000463511 FAM92AA1XBS5 289 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 BEST1O76090 585 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 VNN1O95497 513 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 CFIP05156 583 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 HOXB2P14652 356 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 GABRG2P18507 467 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 WASP42768 502 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 RPL6Q02878 288 aaKnown RBP24.51■■□□□ 1.51
SSNA1-203ENST00000463511 PREPLQ4J6C6 727 aaPredicted RBP24.51■■□□□ 1.51
SSNA1-203ENST00000463511 SPDYCQ5MJ68 293 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 ISM2Q6H9L7 571 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 SLC23A3Q6PIS1 610 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 MIB1Q86YT6 1006 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 DEFB119Q8N690 84 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 ZMIZ2Q8NF64 920 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 SMOQ99835 787 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 DUSP9Q99956 384 aaKnown RBP24.51■■□□□ 1.51
SSNA1-203ENST00000463511 SCNM1Q9BWG6 230 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 FSCN3Q9NQT6 498 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 COMMD8Q9NX08 183 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 CALCOCO1Q9P1Z2 691 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 HMGXB4Q9UGU5 601 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 PILRBQ9UKJ0 227 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 HCN2Q9UL51 889 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 ZMIZ1Q9ULJ6 1067 aa24.51■■□□□ 1.51
SSNA1-203ENST00000463511 TLR5O60602 858 aa24.5■■□□□ 1.51
SSNA1-203ENST00000463511 C4BPAP04003 597 aaKnown RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms