RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SH3RF2Q8TEC5 729 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 FAM149B1Q96BN6 582 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 SLC22A12Q96S37 553 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 CPXM1Q96SM3 734 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 AGPAT1Q99943 283 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 RNF38Q9H0F5 515 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 NMUR1Q9HB89 426 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 CYTH4Q9UIA0 394 aa20.75■□□□□ 0.91
COL9A3-204ENST00000463487 NCOR1O75376 2440 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 CAPN9O14815 690 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 CHADO15335 359 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 GYPCP04921 128 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 TNFAIP3P21580 790 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 PRKCIP41743 596 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 NSFP46459 744 aaKnown RBP20.74■□□□□ 0.91
COL9A3-204ENST00000463487 NOMO3P69849 1222 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 USP4Q13107 963 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 GRM2Q14416 872 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 TDRD12Q587J7 1177 aaKnown RBP20.74■□□□□ 0.91
COL9A3-204ENST00000463487 NAA35Q5VZE5 725 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 IRF2BP2Q7Z5L9 587 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 GPIHBP1Q8IV16 184 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 DNASE1L2Q92874 299 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 C18orf8Q96DM3 657 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 RPP25Q9BUL9 199 aaKnown RBP20.74■□□□□ 0.91
COL9A3-204ENST00000463487 SLC2A4RGQ9NR83 387 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 ZNHIT6Q9NWK9 470 aaKnown RBP20.74■□□□□ 0.91
COL9A3-204ENST00000463487 OSER1Q9NX31 292 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 SMPD4Q9NXE4 827 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 FBXL21Q9UKT6 434 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 CCL26Q9Y258 94 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 SH3BP1Q9Y3L3 701 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 MYO10Q9HD67 2058 aa20.74■□□□□ 0.91
COL9A3-204ENST00000463487 LEFTY2O00292 366 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 SLC9A3R1O14745 358 aaPredicted RBP20.73■□□□□ 0.91
COL9A3-204ENST00000463487 CYP1A1P04798 512 aaPredicted RBP20.73■□□□□ 0.91
COL9A3-204ENST00000463487 GLI1P08151 1106 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 GDI1P31150 447 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 COG7P83436 770 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 ZXDAP98168 799 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 MTF1Q14872 753 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 ZNF77Q15935 545 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 PTPN20Q4JDL3 420 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 OR6B2Q6IFH4 312 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 BEND5Q7L4P6 421 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 EDAQ92838 391 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 PLA2G2FQ9BZM2 168 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 POPDC2Q9HBU9 364 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 ASNSD1Q9NWL6 643 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 RASAL2Q9UJF2 1139 aa20.73■□□□□ 0.91
COL9A3-204ENST00000463487 LSM7Q9UK45 103 aaKnown RBP20.73■□□□□ 0.91
COL9A3-204ENST00000463487 HELZP42694 1942 aaKnown RBP20.72■□□□□ 0.91
COL9A3-204ENST00000463487 PAPSS1O43252 624 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-204ENST00000463487 GABBR2O75899 941 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 CHRNB2P17787 502 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 CASP14P31944 242 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 IFNAR2P48551 515 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 KPNA1P52294 538 aaPredicted RBP20.72■□□□□ 0.91
COL9A3-204ENST00000463487 YWHAZP63104 245 aaKnown RBP20.72■□□□□ 0.91
COL9A3-204ENST00000463487 PDGFRLQ15198 375 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 BHLHA9Q7RTU4 235 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 CNGA4Q8IV77 575 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 CSGALNACT1Q8TDX6 532 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 CLEC4CQ8WTT0 213 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 CPA5Q8WXQ8 436 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 NDRG1Q92597 394 aaKnown RBP20.72■□□□□ 0.91
COL9A3-204ENST00000463487 MRFAP1L1Q96HT8 127 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 HAUS4Q9H6D7 363 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 TRPV5Q9NQA5 729 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 MARCH2Q9P0N8 246 aa20.72■□□□□ 0.91
COL9A3-204ENST00000463487 E2F8A0AVK6 867 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 PI4K2BG5E9Z4 385 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 NARSO43776 548 aaKnown RBP20.71■□□□□ 0.91
COL9A3-204ENST00000463487 HSF2BPO75031 334 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 ERBB2P04626 1255 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 SERPING1P05155 500 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 NCAM1P13591 858 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 SCNN1AP37088 669 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 GABRB2P47870 512 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 PGFP49763 221 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 GPC5P78333 572 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 SIGLEC14Q08ET2 396 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 EFEMP1Q12805 493 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 CLEC16AQ2KHT3 1053 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 TMC6Q7Z403 805 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 MIB1Q86YT6 1006 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 OR8K1Q8NGG5 319 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 EDEM1Q92611 657 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 RSPRY1Q96DX4 576 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 CFAP97Q9P2B7 532 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 WDR35Q9P2L0 1181 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 TBC1D14Q9P2M4 693 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 WNT16Q9UBV4 365 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 NUDT5Q9UKK9 219 aa20.71■□□□□ 0.91
COL9A3-204ENST00000463487 TBX18O95935 607 aa20.7■□□□□ 0.9
COL9A3-204ENST00000463487 CALB1P05937 261 aa20.7■□□□□ 0.9
COL9A3-204ENST00000463487 ZNF75DP51815 510 aa20.7■□□□□ 0.9
COL9A3-204ENST00000463487 SLC6A3Q01959 620 aa20.7■□□□□ 0.9
COL9A3-204ENST00000463487 CENPCQ03188 943 aa20.7■□□□□ 0.9
COL9A3-204ENST00000463487 MSANTD2Q6P1R3 559 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms