RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 IRF1P10914 325 aa21.96■■□□□ 1.11
CPSF7-209ENST00000463244 WASP42768 502 aa21.96■■□□□ 1.11
CPSF7-209ENST00000463244 STK38Q15208 465 aa21.96■■□□□ 1.11
CPSF7-209ENST00000463244 FUKQ8N0W3 1084 aa21.96■■□□□ 1.11
CPSF7-209ENST00000463244 LINC00301Q8NCQ3 95 aa21.96■■□□□ 1.11
CPSF7-209ENST00000463244 TNIP3Q96KP6 325 aa21.96■■□□□ 1.11
CPSF7-209ENST00000463244 ZSCAN16Q9H4T2 348 aaPredicted RBP21.96■■□□□ 1.11
CPSF7-209ENST00000463244 KRT82Q9NSB4 513 aa21.96■■□□□ 1.11
CPSF7-209ENST00000463244 H0Y626 953 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 ARHGAP33O14559 1287 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 GREM1O60565 184 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 TLR5O60602 858 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 PHACTR2O75167 634 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 ZNF217O75362 1048 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 AP1G2O75843 785 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 TRIM16O95361 564 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 HOXB3P14651 431 aaPredicted RBP21.95■■□□□ 1.1
CPSF7-209ENST00000463244 CASP4P49662 377 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 PGFP49763 221 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 ZNF699Q32M78 642 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 EGFLAMQ63HQ2 1017 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 GRAMD4Q6IC98 578 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 HTR3DQ70Z44 454 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 SLC41A1Q8IVJ1 513 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 C12orf56Q8IXR9 622 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 MINDY1Q8N5J2 469 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 DHX58Q96C10 678 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 C7orf25Q9BPX7 421 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 NACA2Q9H009 215 aa21.95■■□□□ 1.1
CPSF7-209ENST00000463244 DNAJC17Q9NVM6 304 aaKnown RBP21.95■■□□□ 1.1
CPSF7-209ENST00000463244 CGNQ9P2M7 1197 aaKnown RBP21.95■■□□□ 1.1
CPSF7-209ENST00000463244 SPTLC2O15270 562 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 CACNG3O60359 315 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 NDUFV2P19404 249 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 FAM193AP78312 1265 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 BIRC3Q13489 604 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 COL9A2Q14055 689 aaPredicted RBP21.94■■□□□ 1.1
CPSF7-209ENST00000463244 BMT2Q1RMZ1 405 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 ZNF667Q5HYK9 610 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 SCARA5Q6ZMJ2 495 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 UNC13DQ70J99 1090 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 CHPFQ8IZ52 775 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 IQUBQ8NA54 791 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 ZMIZ2Q8NF64 920 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 PLEKHO2Q8TD55 490 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 IPO4Q8TEX9 1081 aaKnown RBP21.94■■□□□ 1.1
CPSF7-209ENST00000463244 ACOX2Q99424 681 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 GABRG3Q99928 467 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 SDCBP2Q9H190 292 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 CYP8B1Q9UNU6 501 aa21.94■■□□□ 1.1
CPSF7-209ENST00000463244 A0A1W2PQD8 194 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 FAM221BA6H8Z2 402 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 NEDD8-MDP1E9PL57 170 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 ZBTB24O43167 697 aaPredicted RBP21.93■■□□□ 1.1
CPSF7-209ENST00000463244 EXOC3O60645 756 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 PPP6R2O75170 966 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 BEST1O76090 585 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 CD59P13987 128 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 RDXP35241 583 aaKnown RBP21.93■■□□□ 1.1
CPSF7-209ENST00000463244 SDE2Q6IQ49 451 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 ACOT1Q86TX2 421 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 OR2I1PQ8NGU4 316 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 HSPA12BQ96MM6 686 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 XPO6Q96QU8 1125 aaKnown RBP21.93■■□□□ 1.1
CPSF7-209ENST00000463244 SMOQ99835 787 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 FBXO44Q9H4M3 255 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 CSNK1G1Q9HCP0 422 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 DNAAF2Q9NVR5 837 aaKnown RBP21.93■■□□□ 1.1
CPSF7-209ENST00000463244 MARK1Q9P0L2 795 aa21.93■■□□□ 1.1
CPSF7-209ENST00000463244 PRRT4C9JH25 899 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 CLSTN1O94985 981 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 TBX18O95935 607 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 SYPP08247 313 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 CCDC130P13994 396 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 TYRP14679 529 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 AP3M2P53677 418 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 CLDN10P78369 228 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 NCOA4Q13772 614 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 HNRNPDQ14103 355 aaKnown RBP21.92■■□□□ 1.1
CPSF7-209ENST00000463244 TRIML1Q8N9V2 468 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 PARD3BQ8TEW8 1205 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 ELMO3Q96BJ8 720 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 INTS4Q96HW7 963 aaKnown RBP21.92■■□□□ 1.1
CPSF7-209ENST00000463244 BBS2Q9BXC9 721 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 KLF16Q9BXK1 252 aaPredicted RBP21.92■■□□□ 1.1
CPSF7-209ENST00000463244 TLR8Q9NR97 1041 aaKnown RBP21.92■■□□□ 1.1
CPSF7-209ENST00000463244 WDR35Q9P2L0 1181 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 TFIP11Q9UBB9 837 aaKnown RBP21.92■■□□□ 1.1
CPSF7-209ENST00000463244 ACACAQ13085 2346 aa21.92■■□□□ 1.1
CPSF7-209ENST00000463244 LRRIQ3A6PVS8 624 aaPredicted RBP21.91■■□□□ 1.1
CPSF7-209ENST00000463244 VNN1O95497 513 aa21.91■■□□□ 1.1
CPSF7-209ENST00000463244 C4BPAP04003 597 aaKnown RBP21.91■■□□□ 1.1
CPSF7-209ENST00000463244 CASP1P29466 404 aa21.91■■□□□ 1.1
CPSF7-209ENST00000463244 RING1Q06587 406 aa21.91■■□□□ 1.1
CPSF7-209ENST00000463244 KNOP1Q1ED39 458 aaKnown RBP21.91■■□□□ 1.1
CPSF7-209ENST00000463244 ZNF423Q2M1K9 1284 aa21.91■■□□□ 1.1
CPSF7-209ENST00000463244 SHC4Q6S5L8 630 aa21.91■■□□□ 1.1
CPSF7-209ENST00000463244 TPGS1Q6ZTW0 290 aa21.91■■□□□ 1.1
CPSF7-209ENST00000463244 TOGARAM2Q6ZUX3 1019 aa21.91■■□□□ 1.1
CPSF7-209ENST00000463244 RAB44Q7Z6P3 723 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms