RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 HSP90AA4PQ58FG1 418 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 UBA3Q8TBC4 463 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 SECISBP2LQ93073 1101 aaKnown RBP13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 TRIM62Q9BVG3 475 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 EBF3Q9H4W6 596 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 GTSE1Q9NYZ3 720 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 PCDHGC3Q9UN70 934 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 SH3BP1Q9Y3L3 701 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 TRDMT1O14717 391 aaKnown RBP13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 ADIGQ0VDE8 80 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 GJB7Q6PEY0 223 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 FAM71AQ8IYT1 594 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 PRSS33Q8NF86 280 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 ZNF606Q8WXB4 792 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 FUCA2Q9BTY2 467 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 LSM14BQ9BX40 385 aaKnown RBP13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 ULBP1Q9BZM6 244 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 OSER1Q9NX31 292 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 SMPD4Q9NXE4 827 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 LSM7Q9UK45 103 aaKnown RBP13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 ZNF510Q9Y2H8 683 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 WNT6Q9Y6F9 365 aa13.72□□□□□ -0.21
R3HDM1-213ENST00000463230 THAP12O43422 761 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 ARSAP15289 507 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 CDK11BP21127 795 aaKnown RBP13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 SNX16P57768 344 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 COG7P83436 770 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 ZXDBP98169 803 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 TNK2Q07912 1038 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 C10orf120Q5SQS8 335 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 HTR3DQ70Z44 454 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 BEND5Q7L4P6 421 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 AOPEPQ8N6M6 819 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 CCDC26Q8TAB7 109 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 NAA15Q9BXJ9 866 aaKnown RBP13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 STK33Q9BYT3 514 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 DCLK3Q9C098 648 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 LHX5Q9H2C1 402 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 CHRDQ9H2X0 955 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 STRIP2Q9ULQ0 834 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 F5P12259 2224 aa13.71□□□□□ -0.21
R3HDM1-213ENST00000463230 ADH1CP00326 375 aa13.71□□□□□ -0.22
R3HDM1-213ENST00000463230 UCHL3P15374 230 aa13.71□□□□□ -0.22
R3HDM1-213ENST00000463230 EIF2DP41214 584 aaKnown RBP13.71□□□□□ -0.22
R3HDM1-213ENST00000463230 GPD2P43304 727 aa13.71□□□□□ -0.22
R3HDM1-213ENST00000463230 DAOAP59103 153 aa13.71□□□□□ -0.22
R3HDM1-213ENST00000463230 FZD5Q13467 585 aa13.71□□□□□ -0.22
R3HDM1-213ENST00000463230 PMF1Q6P1K2 205 aa13.71□□□□□ -0.22
R3HDM1-213ENST00000463230 BHLHA9Q7RTU4 235 aa13.71□□□□□ -0.22
R3HDM1-213ENST00000463230 VPS16Q9H269 839 aa13.71□□□□□ -0.22
R3HDM1-213ENST00000463230 ABCC13Q9NSE7 274 aa13.71□□□□□ -0.22
R3HDM1-213ENST00000463230 COL4A3Q01955 1670 aa13.71□□□□□ -0.22
R3HDM1-213ENST00000463230 TULP2O00295 520 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 DCNP07585 359 aaKnown RBP13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 CHRNB1P11230 501 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 USP8P40818 1118 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 PGFP49763 221 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 GRSF1Q12849 480 aaKnown RBP eCLIP13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 DRAP1Q14919 205 aaPredicted RBP13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 TMEM196Q5HYL7 178 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 BTBD8Q5XKL5 378 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 TRIM68Q6AZZ1 485 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 MSANTD2Q6P1R3 559 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 GOLGA1Q92805 767 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 ERGIC2Q96RQ1 377 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 SLC4A5Q9BY07 1137 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 MTF2Q9Y483 593 aaPredicted RBP13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 DRD1P21728 446 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 GJA4P35212 333 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 ZNF165P49910 485 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 TCF15Q12870 199 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 FBXO43Q4G163 708 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 ADGRG2Q8IZP9 1017 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 PLD4Q96BZ4 506 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 NOX5Q96PH1 765 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 GANQ9H2C0 597 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 HSD3B7Q9H2F3 369 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 FBXO4Q9UKT5 387 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 NDRG2Q9UN36 371 aaKnown RBP13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 HBS1LQ9Y450 684 aaKnown RBP13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 CEP83Q9Y592 693 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 FHOD1Q9Y613 1164 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 TRIOO75962 3097 aa13.7□□□□□ -0.22
R3HDM1-213ENST00000463230 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 FOXN3O00409 490 aaPredicted RBP13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 CYP17A1P05093 508 aa13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 CD72P21854 359 aa13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 SOX9P48436 509 aa13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 TPM4P67936 248 aa13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 APBA1Q02410 837 aa13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 ZNF528Q3MIS6 628 aa13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 PREPLQ4J6C6 727 aaPredicted RBP13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 DENND1BQ6P3S1 775 aa13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 RSRC2Q7L4I2 434 aaKnown RBP13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 TMEM110Q86TL2 294 aa13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 C1orf210Q8IVY1 113 aa13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 RNF139Q8WU17 664 aa13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 P2RY13Q9BPV8 354 aa13.69□□□□□ -0.22
R3HDM1-213ENST00000463230 LINC00597Q9H2U6 94 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms