RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 EPB41L4BQ9H329 900 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 LRRC4Q9HBW1 653 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 GEMIN8Q9NWZ8 242 aaKnown RBP15.11■□□□□ 0.01
HDAC6-213ENST00000462730 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.11■□□□□ 0.01
HDAC6-213ENST00000462730 MYBPHLA2RUH7 354 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 GOLGA6L10A6NI86 522 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 EBAG9O00559 213 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 AP1G2O75843 785 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 ENDOD1O94919 500 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 CXCL10P02778 98 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 ITGAVP06756 1048 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 PCSK1P29120 753 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 SKOR1P84550 965 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 RNASELQ05823 741 aaKnown RBP15.1■□□□□ 0.01
HDAC6-213ENST00000462730 ADCY1Q08828 1119 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 SLMAPQ14BN4 828 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 ZC3H12AQ5D1E8 599 aaKnown RBP15.1■□□□□ 0.01
HDAC6-213ENST00000462730 ICE2Q659A1 982 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 SIX6OS1Q8N1H7 587 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 GLIS1Q8NBF1 620 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 BBOF1Q8ND07 529 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 CCHCR1Q8TD31 782 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 RSPH1Q8WYR4 309 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 KCTD13Q8WZ19 329 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 FAM149B1Q96BN6 582 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 TBCBQ99426 244 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 DDX23Q9BUQ8 820 aaKnown RBP15.1■□□□□ 0.01
HDAC6-213ENST00000462730 MAK16Q9BXY0 300 aaKnown RBP15.1■□□□□ 0.01
HDAC6-213ENST00000462730 PABPC3Q9H361 631 aaKnown RBP15.1■□□□□ 0.01
HDAC6-213ENST00000462730 ATP11BQ9Y2G3 1177 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 PCDHB7Q9Y5E2 793 aa15.1■□□□□ 0.01
HDAC6-213ENST00000462730 M0QZQ0 153 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 SGK1O00141 431 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 CLGNO14967 610 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 DAB1O75553 588 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 ZSCAN5DPP0CG00 497 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 ETS1P14921 441 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 CHKAP35790 457 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 GJA8P48165 433 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 LBX1P52954 281 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 RABGGTBP53611 331 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 PDK2Q15119 407 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 P3H1Q32P28 736 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 DENND2CQ68D51 928 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 DCLRE1AQ6PJP8 1040 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 DEFB128Q7Z7B8 93 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 TADA2BQ86TJ2 420 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 COLGALT2Q8IYK4 626 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 ABI1Q8IZP0 508 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 PCED1BQ96HM7 432 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 SMOQ99835 787 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 RTP3Q9BQQ7 232 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 TMEM121Q9BTD3 319 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 C11orf84Q9BUA3 381 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-213ENST00000462730 ADAM33Q9BZ11 813 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 TMBIM4Q9HC24 238 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 AAASQ9NRG9 546 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 KANSL3Q9P2N6 904 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 DNAJB4Q9UDY4 337 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 TBX21Q9UL17 535 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 MICAL3Q7RTP6 2002 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 A0A087WUV0 522 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-213ENST00000462730 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-213ENST00000462730 APOC4-APOC2K7ER74 178 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 APOC2P02655 101 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 CYP11A1P05108 521 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 MYZAPP0CAP1 466 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 PECAM1P16284 738 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-213ENST00000462730 NDUFV1P49821 464 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 GATMP50440 423 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 ATXN1P54253 815 aaKnown RBP15.09■□□□□ 0.01
HDAC6-213ENST00000462730 MRPS5P82675 430 aaKnown RBP15.09■□□□□ 0.01
HDAC6-213ENST00000462730 IFFO1Q0D2I5 559 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 TFDP2Q14188 446 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 CA9Q16790 459 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 KCTD16Q68DU8 428 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 MAP7D3Q8IWC1 876 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 DEFB106AQ8N104 65 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 SH2D3CQ8N5H7 860 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 MYCBPAPQ8TBZ2 947 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 SPATA18Q8TC71 538 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 CENPIQ92674 756 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-213ENST00000462730 SUSD3Q96L08 255 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 FAM193BQ96PV7 902 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-213ENST00000462730 CENPHQ9H3R5 247 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 SEMA4AQ9H3S1 761 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 PCDH18Q9HCL0 1135 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 DSEQ9UL01 958 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 LRFN2Q9ULH4 789 aa15.09■□□□□ 0.01
HDAC6-213ENST00000462730 PRG3Q9Y2Y8 225 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-213ENST00000462730 TTC3P53804 2025 aa15.08■□□□□ 0.01
HDAC6-213ENST00000462730 MDM4O15151 490 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 PARNO95453 639 aaKnown RBP15.08■□□□□ 0
HDAC6-213ENST00000462730 RARGP13631 454 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 PAX3P23760 479 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 MATKP42679 507 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 OR1G1P47890 313 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 SULT1E1P49888 294 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 TKTL1P51854 596 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 EIF3EP60228 445 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms