RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 SIX6OS1Q8N1H7 587 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 ATOH1Q92858 354 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-203ENST00000462700 WBP2Q969T9 261 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 CDK5RAP1Q96SZ6 601 aaKnown RBP19.79■□□□□ 0.76
COL9A3-203ENST00000462700 IER2Q9BTL4 223 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 ACP6Q9NPH0 428 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 RBM12Q9NTZ6 932 aaKnown RBP19.79■□□□□ 0.76
COL9A3-203ENST00000462700 FAM86C1Q9NVL1 165 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 TBC1D14Q9P2M4 693 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 DNMT3LQ9UJW3 386 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 MED7O43513 233 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 LETM1O95202 739 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-203ENST00000462700 CYP17A1P05093 508 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 LCP1P13796 627 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 USP8P40818 1118 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 RGS7P49802 495 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 GOLGA8FQ08AF8 430 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 GOLGA8DPQ0D2H9 430 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 MTAPQ13126 283 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 CCINQ13939 588 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 MEA1Q16626 185 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 TMEM196Q5HYL7 178 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 DGKKQ5KSL6 1271 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 MAML2Q8IZL2 1156 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-203ENST00000462700 SCML4Q8N228 414 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 ZNF606Q8WXB4 792 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 NDRG1Q92597 394 aaKnown RBP19.78■□□□□ 0.76
COL9A3-203ENST00000462700 OTUB2Q96DC9 234 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 HSFY1Q96LI6 401 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 VPS16Q9H269 839 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 CNGB3Q9NQW8 809 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 MUC6Q6W4X9 2439 aa19.78■□□□□ 0.76
COL9A3-203ENST00000462700 THAP12O43422 761 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 LAMTOR5O43504 91 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 GREM1O60565 184 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 GABBR2O75899 941 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 DAOAP59103 153 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 GRSF1Q12849 480 aaKnown RBP eCLIP19.77■□□□□ 0.763e-8■■■■■ 27.8
COL9A3-203ENST00000462700 NCAPHQ15003 741 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 DHCR24Q15392 516 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 KLHDC7AQ5VTJ3 777 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 NAIF1Q69YI7 327 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-203ENST00000462700 FSTL4Q6MZW2 842 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 HTR3DQ70Z44 454 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 BBS7Q8IWZ6 715 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 P2RY13Q9BPV8 354 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 RASAL2Q9UJF2 1139 aa19.77■□□□□ 0.76
COL9A3-203ENST00000462700 PIK3R2O00459 728 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 TPM2P07951 284 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 GPD2P43304 727 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 GALK1P51570 392 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 EFEMP1Q12805 493 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 GAS6Q14393 721 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 KLHL40Q2TBA0 621 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 GAB4Q2WGN9 574 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 ANO6Q4KMQ2 910 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 BTBD8Q5XKL5 378 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 DENND1BQ6P3S1 775 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 RHBDF2Q6PJF5 856 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 Q6ZS52 159 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 MIB1Q86YT6 1006 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 SYNPOQ8N3V7 929 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 CD101Q93033 1021 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 EXOC4Q96A65 974 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 PHOX2BQ99453 314 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 LSM14BQ9BX40 385 aaKnown RBP19.76■□□□□ 0.75
COL9A3-203ENST00000462700 FBRSL1Q9HCM7 1045 aaKnown RBP19.76■□□□□ 0.75
COL9A3-203ENST00000462700 LSM7Q9UK45 103 aaKnown RBP19.76■□□□□ 0.75
COL9A3-203ENST00000462700 FHOD1Q9Y613 1164 aa19.76■□□□□ 0.75
COL9A3-203ENST00000462700 YJEFN3A6XGL0 299 aa19.75■□□□□ 0.75
COL9A3-203ENST00000462700 E7ENQ6 273 aa19.75■□□□□ 0.75
COL9A3-203ENST00000462700 FOXN3O00409 490 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-203ENST00000462700 ADH1CP00326 375 aa19.75■□□□□ 0.75
COL9A3-203ENST00000462700 SP9P0CG40 484 aa19.75■□□□□ 0.75
COL9A3-203ENST00000462700 PNMA6AP0CW24 399 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-203ENST00000462700 ZNF18P17022 549 aa19.75■□□□□ 0.75
COL9A3-203ENST00000462700 RPL34P49207 117 aaKnown RBP19.75■□□□□ 0.75
COL9A3-203ENST00000462700 MAMSTRQ6ZN01 415 aa19.75■□□□□ 0.75
COL9A3-203ENST00000462700 RSRC2Q7L4I2 434 aaKnown RBP19.75■□□□□ 0.75
COL9A3-203ENST00000462700 AOPEPQ8N6M6 819 aa19.75■□□□□ 0.75
COL9A3-203ENST00000462700 IRGQQ8WZA9 623 aa19.75■□□□□ 0.75
COL9A3-203ENST00000462700 NAT10Q9H0A0 1025 aaKnown RBP19.75■□□□□ 0.75
COL9A3-203ENST00000462700 PRMT8Q9NR22 394 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-203ENST00000462700 LIMA1Q9UHB6 759 aaKnown RBP19.75■□□□□ 0.75
COL9A3-203ENST00000462700 FBXO4Q9UKT5 387 aa19.75■□□□□ 0.75
COL9A3-203ENST00000462700 STC2O76061 302 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 FBXO21O94952 628 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 EGFP01133 1207 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 ADH5P11766 374 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 UCHL3P15374 230 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 DRD1P21728 446 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 OPRD1P41143 372 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 COPB1P53618 953 aaKnown RBP19.74■□□□□ 0.75
COL9A3-203ENST00000462700 COG7P83436 770 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 PTK2Q05397 1052 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 RAPGEF1Q13905 1077 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 DRAP1Q14919 205 aaPredicted RBP19.74■□□□□ 0.75
COL9A3-203ENST00000462700 LY6G5CQ5SRR4 150 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 FKBP15Q5T1M5 1219 aa19.74■□□□□ 0.75
COL9A3-203ENST00000462700 BSPRYQ5W0U4 402 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms