RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 MYL6P60660 151 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 IRX4P78413 519 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 CYP27A1Q02318 531 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ENPEPQ07075 957 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 PPP3CAQ08209 521 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 FOXC1Q12948 553 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 MYO1EQ12965 1108 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 NR1H3Q13133 447 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 DHCR24Q15392 516 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ZACNQ401N2 412 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 USP39Q53GS9 565 aaKnown RBP8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 MDH1BQ5I0G3 518 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 PEAR1Q5VY43 1037 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ANKRD40Q6AI12 368 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ISM2Q6H9L7 571 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 C11orf74Q86VG3 221 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 FAM186BQ8IYM0 893 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ADGRG2Q8IZP9 1017 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ALLCQ8N6M5 410 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 KIAA1958Q8N8K9 716 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 KDF1Q8NAX2 398 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 MYCBPAPQ8TBZ2 947 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 RLN3Q8WXF3 142 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 GATA6Q92908 595 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 C8orf48Q96LL4 319 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ZNF518BQ9C0D4 1074 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ZDHHC4Q9NPG8 344 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 TMEM9BQ9NQ34 198 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 LMBRD1Q9NUN5 540 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 SMPD4Q9NXE4 827 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 TRPM5Q9NZQ8 1165 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 EVLQ9UI08 416 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 MBD1Q9UIS9 605 aaPredicted RBP8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ZMIZ1Q9ULJ6 1067 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 FRMD4BQ9Y2L6 1034 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ADAMTS20P59510 1910 aa8.41□□□□□ -1.06
CDC42BPA-210ENST00000462553 ATXN2Q99700 1313 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 A0A0A0MRY4 1105 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 BIN1O00499 593 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 TRIM66O15016 1216 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 KHNYNO15037 678 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 TACC1O75410 805 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 KAT7O95251 611 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 KLF8O95600 359 aaPredicted RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 PDGFRBP09619 1106 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 CEACAM1P13688 526 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 ATICP31939 592 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 GRIK1P39086 918 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 EIF2DP41214 584 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 PTGER3P43115 390 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 DHPSP49366 369 aaPredicted RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 VAMP7P51809 220 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 MRPS21P82921 87 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 KDSRQ06136 332 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 TAF10Q12962 218 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 ADAM9Q13443 819 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 NCOA4Q13772 614 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 MAPRE1Q15691 268 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 MAP7D1Q3KQU3 841 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 EMC10Q5UCC4 262 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 DAB2IPQ5VWQ8 1189 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 TTI2Q6NXR4 508 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 RHBDF2Q6PJF5 856 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 INTS8Q75QN2 995 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 SV2AQ7L0J3 742 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 ETFBKMTQ8IXQ9 262 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 TXNDC5Q8NBS9 432 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 DEFB124Q8NES8 71 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 CCDC26Q8TAB7 109 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 PIGKQ92643 395 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 IPO9Q96P70 1041 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 DUSP9Q99956 384 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 ADAM33Q9BZ11 813 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 SDCBP2Q9H190 292 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 SMYD3Q9H7B4 428 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 TMEM74BQ9NUR3 256 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 PLA2G2EQ9NZK7 142 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 CFAP97Q9P2B7 532 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 HOOK1Q9UJC3 728 aaKnown RBP8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 HCN2Q9UL51 889 aa8.4□□□□□ -1.06
CDC42BPA-210ENST00000462553 MUC22E2RYF6 1773 aaPredicted RBP8.4□□□□□ -1.07
CDC42BPA-210ENST00000462553 GOLGA4Q13439 2230 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 NYNRINQ9P2P1 1898 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 CLDN5O00501 218 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 TNFRSF10BO14763 440 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 IKBKBO14920 756 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 SLC16A3O15427 465 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 ASS1P00966 412 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 HLA-DRAP01903 254 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 ADH5P11766 374 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 RPL13P26373 211 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 ANXA13P27216 316 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 PSMC2P35998 433 aaKnown RBP8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 PPP3CCP48454 512 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 GCLMP48507 274 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 AP3M2P53677 418 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 LRRC63Q05C16 580 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 BIRC3Q13489 604 aa8.39□□□□□ -1.07
CDC42BPA-210ENST00000462553 ZNF699Q32M78 642 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms