RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 NUDT5Q9UKK9 219 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 NDRG2Q9UN36 371 aaKnown RBP10.04□□□□□ -0.8
PKP4-208ENST00000462335 ZNF510Q9Y2H8 683 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 PIAS3Q9Y6X2 628 aa10.04□□□□□ -0.8
PKP4-208ENST00000462335 BDP1A6H8Y1 2624 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 GREB1Q4ZG55 1949 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 KANSL1LA0AUZ9 987 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 SLC12A8A0AV02 714 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 E2F8A0AVK6 867 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 F8VZ95 297 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 TULP2O00295 520 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 TADA3O75528 432 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 TBX18O95935 607 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 ADH1CP00326 375 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 OAS1P00973 400 aaKnown RBP10.03□□□□□ -0.8
PKP4-208ENST00000462335 PNMA6AP0CW24 399 aaPredicted RBP10.03□□□□□ -0.8
PKP4-208ENST00000462335 NCAM1P13591 858 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 FERP16591 822 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 DESP17661 470 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 TNFAIP3P21580 790 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 CLCN1P35523 988 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 CLCN5P51795 746 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 FCHO2Q0JRZ9 810 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 GRSF1Q12849 480 aaKnown RBP eCLIP10.03□□□□□ -0.8
PKP4-208ENST00000462335 MEA1Q16626 185 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 ANO4Q32M45 955 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 PREPLQ4J6C6 727 aaPredicted RBP10.03□□□□□ -0.8
PKP4-208ENST00000462335 RAB41Q5JT25 222 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 EFHC1Q5JVL4 640 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 TOGARAM2Q6ZUX3 1019 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 HFE2Q6ZVN8 426 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 BMP8AQ7Z5Y6 402 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 RALGPS2Q86X27 583 aaPredicted RBP10.03□□□□□ -0.8
PKP4-208ENST00000462335 ZNF677Q86XU0 584 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 CCDC117Q8IWD4 279 aaPredicted RBP10.03□□□□□ -0.8
PKP4-208ENST00000462335 EDEM1Q92611 657 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 LHX5Q9H2C1 402 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 ACP6Q9NPH0 428 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 TRPV5Q9NQA5 729 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 CYLDQ9NQC7 956 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.03□□□□□ -0.8
PKP4-208ENST00000462335 GTSE1Q9NYZ3 720 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 IFNKQ9P0W0 207 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 SLC12A6Q9UHW9 1150 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 WNT6Q9Y6F9 365 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 USP3Q9Y6I4 520 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 CUL9Q8IWT3 2517 aa10.03□□□□□ -0.8
PKP4-208ENST00000462335 DENND4CQ5VZ89 1909 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 A0A1W2PQC6 194 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 FAM92AA1XBS5 289 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 ANKRD62A6NC57 917 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 NRG2O14511 850 aaPredicted RBP10.02□□□□□ -0.81
PKP4-208ENST00000462335 TEX33O43247 280 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 LSM8O95777 96 aaKnown RBP10.02□□□□□ -0.81
PKP4-208ENST00000462335 LTFP02788 710 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 CYBBP04839 570 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 ZDHHC11BP0C7U3 371 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 CD72P21854 359 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 GBP1P32455 592 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 GPD2P43304 727 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 DAOAP59103 153 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 RNASE9P60153 205 aaKnown RBP10.02□□□□□ -0.81
PKP4-208ENST00000462335 TNK2Q07912 1038 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 LRRC32Q14392 662 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 ZNF77Q15935 545 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 ASIC2Q16515 512 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 SFMBT2Q5VUG0 894 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 TRIM68Q6AZZ1 485 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 PM20D1Q6GTS8 502 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 KLHDC10Q6PID8 442 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 TRIM72Q6ZMU5 477 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 SND1Q7KZF4 910 aaKnown RBP eCLIP10.02□□□□□ -0.819e-9■□□□□ 8.6
PKP4-208ENST00000462335 VPS36Q86VN1 386 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 CCDC26Q8TAB7 109 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 CPLX3Q8WVH0 158 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 NDRG1Q92597 394 aaKnown RBP10.02□□□□□ -0.81
PKP4-208ENST00000462335 OTUB2Q96DC9 234 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 C18orf8Q96DM3 657 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 RSPRY1Q96DX4 576 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 IQCDQ96DY2 449 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 PRRX2Q99811 253 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
PKP4-208ENST00000462335 GANQ9H2C0 597 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 ZNHIT6Q9NWK9 470 aaKnown RBP10.02□□□□□ -0.81
PKP4-208ENST00000462335 PCDHGC3Q9UN70 934 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 SIK3Q9Y2K2 1263 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.02□□□□□ -0.817e-6■■□□□ 12.1
PKP4-208ENST00000462335 VCANP13611 3396 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 NUP210Q8TEM1 1887 aaPredicted RBP10.02□□□□□ -0.81
PKP4-208ENST00000462335 MYO16Q9Y6X6 1858 aa10.02□□□□□ -0.81
PKP4-208ENST00000462335 A0A1B0GTH6 734 aa10.01□□□□□ -0.81
PKP4-208ENST00000462335 KRBA1A5PL33 1030 aa10.01□□□□□ -0.81
PKP4-208ENST00000462335 YJEFN3A6XGL0 299 aa10.01□□□□□ -0.81
PKP4-208ENST00000462335 E5RJQ4 531 aa10.01□□□□□ -0.81
PKP4-208ENST00000462335 E7ENQ6 273 aa10.01□□□□□ -0.81
PKP4-208ENST00000462335 SPECC1L-ADORA2AF8WAN1 911 aa10.01□□□□□ -0.81
PKP4-208ENST00000462335 SCAMP3O14828 347 aaKnown RBP10.01□□□□□ -0.81
PKP4-208ENST00000462335 MDM4O15151 490 aa10.01□□□□□ -0.81
PKP4-208ENST00000462335 ARSAP15289 507 aa10.01□□□□□ -0.81
PKP4-208ENST00000462335 AVPR2P30518 371 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms