RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 ANKRD35Q8N283 1001 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 TMEM199Q8N511 208 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 REPS2Q8NFH8 660 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 MDM1Q8TC05 714 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 NUP133Q8WUM0 1156 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 TTC17Q96AE7 1141 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 CDK5RAP3Q96JB5 506 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 CLPTM1LQ96KA5 538 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 LRGUKQ96M69 825 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 ZNF512Q96ME7 567 aaPredicted RBP5.67□□□□□ -1.5
COPS3-204ENST00000462236 DMRTA2Q96SC8 542 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 SSBP3Q9BWW4 388 aaPredicted RBP5.67□□□□□ -1.5
COPS3-204ENST00000462236 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 TMEM60Q9H2L4 133 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 SLC28A3Q9HAS3 691 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 ZFR2Q9UPR6 939 aaKnown RBP5.67□□□□□ -1.5
COPS3-204ENST00000462236 TTC3P53804 2025 aa5.67□□□□□ -1.5
COPS3-204ENST00000462236 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.66□□□□□ -1.5
COPS3-204ENST00000462236 A0A0U1RQG5 324 aaPredicted RBP5.66□□□□□ -1.5
COPS3-204ENST00000462236 PATE3B3GLJ2 98 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 MFAP3LO75121 409 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 DUSP11O75319 330 aaKnown RBP5.66□□□□□ -1.5
COPS3-204ENST00000462236 TUSC2O75896 110 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 IPO13O94829 963 aaKnown RBP5.66□□□□□ -1.5
COPS3-204ENST00000462236 BAG3O95817 575 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 SLC25A27O95847 323 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 FGBP02675 491 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 ITGB3P05106 788 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 HLA-DOAP06340 250 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 FCER1AP12319 257 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 CYP2C18P33260 490 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 RABGGTBP53611 331 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 TBX4P57082 545 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 HHEXQ03014 270 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 TLE1Q04724 770 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 CERKLQ49MI3 558 aaPredicted RBP5.66□□□□□ -1.5
COPS3-204ENST00000462236 NAA16Q6N069 864 aaPredicted RBP5.66□□□□□ -1.5
COPS3-204ENST00000462236 DRICH1Q6PGQ1 229 aaPredicted RBP5.66□□□□□ -1.5
COPS3-204ENST00000462236 SPOCD1Q6ZMY3 1216 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 SEM1Q6ZVN7 128 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 CAMKK1Q8N5S9 505 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 DNERQ8NFT8 737 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 CCHCR1Q8TD31 782 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 KAT5Q92993 513 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 RBM15Q96T37 977 aaKnown RBP eCLIP5.66□□□□□ -1.5
COPS3-204ENST00000462236 ACO2Q99798 780 aaKnown RBP5.66□□□□□ -1.5
COPS3-204ENST00000462236 WDCPQ9H6R7 721 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 SIDT1Q9NXL6 827 aaKnown RBP5.66□□□□□ -1.5
COPS3-204ENST00000462236 RAI14Q9P0K7 980 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 CNOT1A5YKK6 2376 aaKnown RBP5.66□□□□□ -1.5
COPS3-204ENST00000462236 GRIN2DO15399 1336 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 UMODL1Q5DID0 1318 aa5.66□□□□□ -1.5
COPS3-204ENST00000462236 DMXL1Q9Y485 3027 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 TBKBP1A7MCY6 615 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 FAM227AF5H4B4 570 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 GPR42O15529 346 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 PRICKLE3O43900 615 aaPredicted RBP5.65□□□□□ -1.5
COPS3-204ENST00000462236 UBXN7O94888 489 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 FTLP02792 175 aaPredicted RBP5.65□□□□□ -1.5
COPS3-204ENST00000462236 PGK2P07205 417 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 ASGR1P07306 291 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 UQCRFS1P1P0C7P4 283 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 UBTFL1P0CB47 393 aaPredicted RBP5.65□□□□□ -1.5
COPS3-204ENST00000462236 GNAT2P19087 354 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 GNALP38405 381 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 PLCD1P51178 756 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 MAP2K6P52564 334 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 AGFG1P52594 562 aaKnown RBP5.65□□□□□ -1.5
COPS3-204ENST00000462236 DYNLL1P63167 89 aaKnown RBP5.65□□□□□ -1.5
COPS3-204ENST00000462236 BMT2Q1RMZ1 405 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 HS1BP3Q53T59 392 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 DCAF17Q5H9S7 520 aaPredicted RBP5.65□□□□□ -1.5
COPS3-204ENST00000462236 ATF7IPQ6VMQ6 1270 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 TTLL10Q6ZVT0 673 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 GPRIN1Q7Z2K8 1008 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 PLXDC1Q8IUK5 500 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 FUKQ8N0W3 1084 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 TTC9BQ8N6N2 239 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 PCSK9Q8NBP7 692 aaKnown RBP5.65□□□□□ -1.5
COPS3-204ENST00000462236 MDGA1Q8NFP4 955 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 NLGN4YQ8NFZ3 816 aaPredicted RBP5.65□□□□□ -1.5
COPS3-204ENST00000462236 MIEF2Q96C03 454 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 MTFMTQ96DP5 389 aaKnown RBP5.65□□□□□ -1.5
COPS3-204ENST00000462236 TMX3Q96JJ7 454 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 GLT1D1Q96MS3 346 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 GNRHR2Q96P88 292 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 OR14A2Q96R54 314 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 MTIF3Q9H2K0 278 aaKnown RBP5.65□□□□□ -1.5
COPS3-204ENST00000462236 GABBR1Q9UBS5 961 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 HDAC5Q9UQL6 1122 aa5.65□□□□□ -1.5
COPS3-204ENST00000462236 BAHCC1Q9P281 2608 aa5.65□□□□□ -1.51
COPS3-204ENST00000462236 ASTN1O14525 1302 aa5.65□□□□□ -1.51
COPS3-204ENST00000462236 KIAA1671Q9BY89 1806 aa5.64□□□□□ -1.51
COPS3-204ENST00000462236 CHD6Q8TD26 2715 aa5.64□□□□□ -1.51
COPS3-204ENST00000462236 FASNP49327 2511 aaKnown RBP5.64□□□□□ -1.51
COPS3-204ENST00000462236 A0A088AWK7 358 aa5.64□□□□□ -1.51
COPS3-204ENST00000462236 FOXS1O43638 330 aa5.64□□□□□ -1.51
COPS3-204ENST00000462236 B3GALT2O43825 422 aa5.64□□□□□ -1.51
COPS3-204ENST00000462236 MTHFD1P11586 935 aaKnown RBP5.64□□□□□ -1.51
COPS3-204ENST00000462236 HOXA5P20719 270 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms