RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 PIK3R2O00459 728 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CHADO15335 359 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PAPSS1O43252 624 aaPredicted RBP12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 LTFP02788 710 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CYP1A1P04798 512 aaPredicted RBP12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CHRNB2P17787 502 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CASP14P31944 242 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ZXDAP98168 799 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PFKPQ01813 784 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 GOLGA8FQ08AF8 430 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 GOLGA8DPQ0D2H9 430 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ZNF77Q15935 545 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PTPN20Q4JDL3 420 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ARHGAP29Q52LW3 1261 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 C10orf120Q5SQS8 335 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 BSPRYQ5W0U4 402 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PPP1R2P3Q6NXS1 205 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 TOGARAM2Q6ZUX3 1019 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 RSRC2Q7L4I2 434 aaKnown RBP12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 BEND5Q7L4P6 421 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ERICH1Q86X53 443 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SCUBE3Q8IX30 993 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SH3RF2Q8TEC5 729 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 RNF139Q8WU17 664 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 IRF7Q92985 503 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 RSPRY1Q96DX4 576 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PLA2G2FQ9BZM2 168 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 BRD9Q9H8M2 597 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SLC2A4RGQ9NR83 387 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ASNSD1Q9NWL6 643 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 BZW2Q9Y6E2 419 aaKnown RBP12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CUL9Q8IWT3 2517 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 MYO16Q9Y6X6 1858 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 TRIOO75962 3097 aa12.22□□□□□ -0.45
TRAF3IP1-204ENST00000462122 PI4K2BG5E9Z4 385 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 LEFTY2O00292 366 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ZNF263O14978 683 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 AP5Z1O43299 807 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 TBX18O95935 607 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ERBB2P04626 1255 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 GLI1P08151 1106 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 UNGP13051 313 aaPredicted RBP12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 GDI1P31150 447 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SCNN1AP37088 669 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 NSFP46459 744 aaKnown RBP12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 GABRB2P47870 512 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CENPCQ03188 943 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 KLHL30Q0D2K2 578 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 GRM2Q14416 872 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 MTF1Q14872 753 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 EFHC1Q5JVL4 640 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 NAA35Q5VZE5 725 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 E4F1Q66K89 784 aaPredicted RBP12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CC2D1AQ6P1N0 951 aaPredicted RBP12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CLEC4CQ8WTT0 213 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 CPLX3Q8WVH0 158 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 NDRG1Q92597 394 aaKnown RBP12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 EDAQ92838 391 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 DNASE1L2Q92874 299 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 FAM149B1Q96BN6 582 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 C18orf8Q96DM3 657 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 MRFAP1L1Q96HT8 127 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ZFRQ96KR1 1074 aaKnown RBP12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 LRRC3BQ96PB8 259 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SYT11Q9BT88 431 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 HAUS4Q9H6D7 363 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 POPDC2Q9HBU9 364 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 TRPV5Q9NQA5 729 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SEPT11Q9NVA2 429 aaKnown RBP12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 SMPD4Q9NXE4 827 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 STRIP2Q9ULQ0 834 aa12.21□□□□□ -0.45
TRAF3IP1-204ENST00000462122 ANAPC1Q9H1A4 1944 aa12.21□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SLC9A3R1O14745 358 aaPredicted RBP12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 CAPN9O14815 690 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 NARSO43776 548 aaKnown RBP12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 HSF2BPO75031 334 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SERPING1P05155 500 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 NCAM1P13591 858 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TNFAIP3P21580 790 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 MMP8P22894 467 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 HNRNPH3P31942 346 aaKnown RBP12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ZNF75DP51815 510 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 YWHAZP63104 245 aaKnown RBP12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 GPC5P78333 572 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 COG7P83436 770 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ZXDBP98169 803 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SIGLEC14Q08ET2 396 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 EFEMP1Q12805 493 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ARID5BQ14865 1188 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 PDGFRLQ15198 375 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 CLEC16AQ2KHT3 1053 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TDRD12Q587J7 1177 aaKnown RBP12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 OR6B2Q6IFH4 312 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 MSANTD2Q6P1R3 559 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 OLFML1Q6UWY5 402 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 HFE2Q6ZVN8 426 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 FAM183BPQ6ZVS7 135 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SLC26A9Q7LBE3 791 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 VPS36Q86VN1 386 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms