RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
SND1-202ENST00000461056 CHORDC1Q9UHD1 332 aaPredicted RBP8.58□□□□□ -1.04
SND1-202ENST00000461056 NR2E1Q9Y466 385 aa8.58□□□□□ -1.04
SND1-202ENST00000461056 NUMBLQ9Y6R0 609 aa8.58□□□□□ -1.04
SND1-202ENST00000461056 COL4A2P08572 1712 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 CACNA1HO95180 2353 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 TECTAO75443 2155 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 TLR5O60602 858 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 FBXO21O94952 628 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 IGLV3-27P01718 113 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 PLEKP08567 350 aaPredicted RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 CDC25BP30305 580 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 GBP2P32456 591 aaPredicted RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 YWHAGP61981 247 aaKnown RBP eCLIP8.57□□□□□ -1.04
SND1-202ENST00000461056 GOLGA8FQ08AF8 430 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 GOLGA8DPQ0D2H9 430 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 TRIM14Q14142 442 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 PPP1R15BQ5SWA1 713 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 SFMBT2Q5VUG0 894 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 NAA35Q5VZE5 725 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 BSPRYQ5W0U4 402 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 TRIM72Q6ZMU5 477 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 Q6ZNB5 142 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 FAM183BPQ6ZVS7 135 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 SLC26A9Q7LBE3 791 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 SCUBE3Q8IX30 993 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 DRC7Q8IY82 874 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 SLC44A3Q8N4M1 653 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 ARL14EPQ8N8R7 260 aaPredicted RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 MAB21L3Q8N8X9 362 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 TMEM35BQ8NCS4 154 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 ZNF397Q8NF99 534 aaPredicted RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 ST13P5Q8NFI4 369 aaPredicted RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 MRPS31Q92665 395 aaKnown RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 NT5C3BQ969T7 300 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 NXPE3Q969Y0 559 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 ACSF2Q96CM8 615 aaPredicted RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 CHFRQ96EP1 664 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 PPP1R13BQ96KQ4 1090 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 PCMTD1Q96MG8 357 aaPredicted RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 SLITRK1Q96PX8 696 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 KXD1Q9BQD3 176 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 ANP32EQ9BTT0 268 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 KLF16Q9BXK1 252 aaPredicted RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 COL25A1Q9BXS0 654 aaPredicted RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 HAUS4Q9H6D7 363 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 SLC2A4RGQ9NR83 387 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 ASNSD1Q9NWL6 643 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 CALCOCO1Q9P1Z2 691 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 IGSF9Q9P2J2 1179 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 TMEM59LQ9UK28 342 aa8.57□□□□□ -1.04
SND1-202ENST00000461056 KIF26AQ9ULI4 1882 aaPredicted RBP8.57□□□□□ -1.04
SND1-202ENST00000461056 COL4A3Q01955 1670 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 OBSL1O75147 1896 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 TRAV19A0A0A6YYK7 116 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 PIK3R2O00459 728 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 NARSO43776 548 aaKnown RBP8.56□□□□□ -1.04
SND1-202ENST00000461056 TPM3P06753 285 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 SKILP12757 684 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 RARGP13631 454 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 LCP1P13796 627 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 KRT9P35527 623 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 ACADSBP45954 432 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 SLC8A3P57103 927 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 PITX1P78337 314 aaPredicted RBP8.56□□□□□ -1.04
SND1-202ENST00000461056 CDK17Q00537 523 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 ARID5AQ03989 594 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 ASIC2Q16515 512 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 ARHGAP15Q53QZ3 475 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 HECTD3Q5T447 861 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 RNF43Q68DV7 783 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 MTSS1LQ765P7 747 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 ARCQ7LC44 396 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 CACNA2D4Q7Z3S7 1137 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 TMEM139Q8IV31 216 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 FMNL3Q8IVF7 1028 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 MFSD6LQ8IWD5 586 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 ZNF687Q8N1G0 1237 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 CPA5Q8WXQ8 436 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 GCNAQ96QF7 691 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 FAM83CQ9BQN1 747 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 KIF9Q9HAQ2 790 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 LRRC4Q9HBW1 653 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 TRPV5Q9NQA5 729 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 TLR8Q9NR97 1041 aaKnown RBP8.56□□□□□ -1.04
SND1-202ENST00000461056 ABHD10Q9NUJ1 306 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 TDP1Q9NUW8 608 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 MUTYHQ9UIF7 546 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 LUC7L2Q9Y383 392 aaKnown RBP8.56□□□□□ -1.04
SND1-202ENST00000461056 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.56□□□□□ -1.04
SND1-202ENST00000461056 MUC6Q6W4X9 2439 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 WDR87Q6ZQQ6 2873 aa8.56□□□□□ -1.04
SND1-202ENST00000461056 OTOL1A6NHN0 477 aaPredicted RBP8.55□□□□□ -1.04
SND1-202ENST00000461056 HEPACAM2A8MVW5 462 aa8.55□□□□□ -1.04
SND1-202ENST00000461056 I6L893 689 aaPredicted RBP8.55□□□□□ -1.04
SND1-202ENST00000461056 LEFTY2O00292 366 aa8.55□□□□□ -1.04
SND1-202ENST00000461056 ZNF263O14978 683 aa8.55□□□□□ -1.04
SND1-202ENST00000461056 MDM4O15151 490 aa8.55□□□□□ -1.04
SND1-202ENST00000461056 SART1O43290 800 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms