RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 CHP1Q99653 195 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 C11orf70Q9BRQ4 267 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 TASP1Q9H6P5 420 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 CLEC1BQ9P126 229 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 UVRAGQ9P2Y5 699 aa11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 DNMT3BQ9UBC3 853 aaKnown RBP11.55□□□□□ -0.56
SMNDC1-203ENST00000460483 LAMA3Q16787 3333 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 ZNF840PA6NDX5 716 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 SIGLEC16A6NMB1 481 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 LINC01565O15544 149 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 ZSCAN12O43309 604 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 TBX10O75333 385 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 LCA5LO95447 670 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 CCDC175P0C221 793 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 SLC2A3P11169 496 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 NCAM1P13591 858 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 HDCP19113 662 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 SSTR3P32745 418 aaPredicted RBP11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 NOS2P35228 1153 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 GPR15P49685 360 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 ACAP1Q15027 740 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 ASTE1Q2TB18 679 aaPredicted RBP11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 PTPN20Q4JDL3 420 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 SDHAF4Q5VUM1 108 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 BSPRYQ5W0U4 402 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 E4F1Q66K89 784 aaPredicted RBP11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 MON1BQ7L1V2 547 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 C12orf76Q8N812 135 aaPredicted RBP11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 KIAA1958Q8N8K9 716 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 SCAMP5Q8TAC9 235 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 ZNF653Q96CK0 615 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 SERPINB11Q96P15 392 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 KCNK17Q96T54 332 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 PCDHB18PQ96TA0 734 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 S1PR5Q9H228 398 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 KIF9Q9HAQ2 790 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 RYDENQ9NUL5 291 aaKnown RBP11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 CNOT8Q9UFF9 292 aaKnown RBP11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 CHORDC1Q9UHD1 332 aaPredicted RBP11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 SLC12A6Q9UHW9 1150 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 DNMT3LQ9UJW3 386 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 TRIP11Q15643 1979 aa11.54□□□□□ -0.56
SMNDC1-203ENST00000460483 NLRC5Q86WI3 1866 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 TRIOBPQ9H2D6 2365 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 A0A1W2PRU2 124 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 MYO1FO00160 1098 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 TULP2O00295 520 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 DPYSL4O14531 572 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 PAPSS1O43252 624 aaPredicted RBP11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 KRT86O43790 486 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 TLR5O60602 858 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 RNF8O76064 485 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 CALCAP01258 141 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 F11P03951 625 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 ERBB2P04626 1255 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 CKMP06732 381 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 PLEKP08567 350 aaPredicted RBP11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 ZDHHC11BP0C7U3 371 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 MSNP26038 577 aaKnown RBP11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 WEE1P30291 646 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 SDC4P31431 198 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 CDR1P51861 262 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 C10orf120Q5SQS8 335 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 MTSS1LQ765P7 747 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 XYLT1Q86Y38 959 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 NXPE3Q969Y0 559 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 MCRS1Q96EZ8 462 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 GMIPQ9P107 970 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 CTTNBP2NLQ9P2B4 639 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 THEGQ9P2T0 379 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 LSM7Q9UK45 103 aaKnown RBP11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 CDH7Q9ULB5 785 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 PCDHA13Q9Y5I0 950 aa11.53□□□□□ -0.56
SMNDC1-203ENST00000460483 KIAA1671Q9BY89 1806 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 GOLGA6L9A6NEM1 432 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 SOWAHDA6NJG2 315 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 GOLGA8SH3BPF8 625 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 H3BQ06 376 aaPredicted RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 HRO43593 1189 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 CFHP08603 1231 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 RARGP13631 454 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 ABCB4P21439 1286 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 GBP2P32456 591 aaPredicted RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 LTBRP36941 435 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 ARHGAP25P42331 645 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 MATKP42679 507 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 HARS2P49590 506 aaKnown RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 USP46P62068 366 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 NNTQ13423 1086 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 MTMR3Q13615 1198 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 PIGHQ14442 188 aaPredicted RBP11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 ARL13BQ3SXY8 428 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 HS1BP3Q53T59 392 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 DCAF6Q58WW2 860 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 GPR158Q5T848 1215 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 PLEKHA7Q6IQ23 1121 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 OLFML1Q6UWY5 402 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 FAM183BPQ6ZVS7 135 aa11.52□□□□□ -0.57
SMNDC1-203ENST00000460483 GPRIN1Q7Z2K8 1008 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms