RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 HUS1O60921 280 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 CNMDO75829 334 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 SKIP12755 728 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 RPL22P35268 128 aaKnown RBP16.01■□□□□ 0.15
LMNB1-203ENST00000460265 EFTUD2Q15029 972 aaKnown RBP eCLIP16.01■□□□□ 0.15
LMNB1-203ENST00000460265 ILDR2Q71H61 639 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 FAM131BQ86XD5 332 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 ALLCQ8N6M5 410 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 ATP11CQ8NB49 1132 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 EIF2AQ9BY44 585 aaKnown RBP16.01■□□□□ 0.15
LMNB1-203ENST00000460265 NXF3Q9H4D5 531 aaKnown RBP16.01■□□□□ 0.15
LMNB1-203ENST00000460265 NR2E3Q9Y5X4 410 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 GNL1P36915 607 aaPredicted RBP16.01■□□□□ 0.15
LMNB1-203ENST00000460265 ARHGAP1Q07960 439 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 OVGP1Q12889 678 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 ACVR2BQ13705 512 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 ZRSR2Q15696 482 aaKnown RBP16.01■□□□□ 0.15
LMNB1-203ENST00000460265 CCDC62Q6P9F0 684 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 XYLT1Q86Y38 959 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 C2orf69Q8N8R5 385 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 CCDC110Q8TBZ0 833 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 TTC25Q96NG3 672 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 ASB7Q9H672 318 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 TUBGCP4Q9UGJ1 667 aa16.01■□□□□ 0.15
LMNB1-203ENST00000460265 A0A0G2JND7 137 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 A0A1W2PPM1 405 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 ZBTB42B2RXF5 422 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 C6orf222P0C671 652 aaPredicted RBP16■□□□□ 0.15
LMNB1-203ENST00000460265 TPBGLP0DKB5 382 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 CACNA2D1P54289 1103 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 ZNF200P98182 395 aaPredicted RBP16■□□□□ 0.15
LMNB1-203ENST00000460265 PTP4A2Q12974 167 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 GALNTL6Q49A17 601 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 DCAF6Q58WW2 860 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 CCNJLQ8IV13 435 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 PPIL6Q8IXY8 311 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 ZCCHC9Q8N567 271 aaKnown RBP16■□□□□ 0.15
LMNB1-203ENST00000460265 SPOCK2Q92563 424 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 RSAD1Q9HA92 442 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 TXLNGQ9NUQ3 528 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 CACNG4Q9UBN1 327 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 PCDHGA4Q9Y5G9 962 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 SOCS7O14512 581 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 GNAZP19086 355 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 CNPY3Q9BT09 278 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 SLCO1B3Q9NPD5 702 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 DMAP1Q9NPF5 467 aaPredicted RBP16■□□□□ 0.15
LMNB1-203ENST00000460265 RECQL4O94761 1208 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 HMGCRP04035 888 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 IVDP26440 423 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 ATXN1P54253 815 aaKnown RBP16■□□□□ 0.15
LMNB1-203ENST00000460265 SNX16P57768 344 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 KLF1Q13351 362 aaPredicted RBP16■□□□□ 0.15
LMNB1-203ENST00000460265 IRGCQ6NXR0 463 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 PMF1Q6P1K2 205 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 LVRNQ6Q4G3 990 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 TRAPPC9Q96Q05 1148 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 TMEM237Q96Q45 408 aa16■□□□□ 0.15
LMNB1-203ENST00000460265 APOL1O14791 398 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 CILPO75339 1184 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 RABGGTBP53611 331 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 MORF4L2Q15014 288 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 TCEAL1Q15170 157 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 GPR142Q7Z601 462 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 AGAP3Q96P47 875 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 TXLNGYQ9BZA5 131 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 CDHR5Q9HBB8 845 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 TXNDC16Q9P2K2 825 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 MCM3APO60318 1980 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 GSTA2P09210 222 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 FAM163BP0C2L3 166 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 ACADSP16219 412 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 SMPD1P17405 629 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 ARL4AP40617 200 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 ELK3P41970 407 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 DEUP1Q05D60 604 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 MYBPC3Q14896 1274 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 PCGF5Q86SE9 256 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 TINF2Q9BSI4 451 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 DNAI2Q9GZS0 605 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 OCEL1Q9H607 264 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 PCDH9Q9HC56 1237 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 INPP5FQ9Y2H2 1132 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 E2F8A0AVK6 867 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 E7ENQ6 273 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 RBL1P28749 1068 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 SESN2P58004 480 aaPredicted RBP15.99■□□□□ 0.15
LMNB1-203ENST00000460265 AP1B1Q10567 949 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 ADAM32Q8TC27 787 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 CXCL16Q9H2A7 254 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 ATXN10Q9UBB4 475 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 NOD1Q9Y239 953 aa15.99■□□□□ 0.15
LMNB1-203ENST00000460265 CCDC78A2IDD5 438 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 M0QZ92 97 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 PEX11AO75192 247 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 WFS1O76024 890 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 SAT1P21673 171 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 NUMBP49757 651 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 FYB2Q5VWT5 728 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 NOTUMQ6P988 496 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms