RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 NUDT17P0C025 328 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 KDELR1P24390 212 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 NCKAP1LP55160 1127 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 RPL10AP62906 217 aaKnown RBP15.24■□□□□ 0.03
PTPRU-205ENST00000460170 KRT33BQ14525 404 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 SLC27A1Q6PCB7 646 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 SCUBE3Q8IX30 993 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 OPTNQ96CV9 577 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 UBE2OQ9C0C9 1292 aaKnown RBP15.24■□□□□ 0.03
PTPRU-205ENST00000460170 TAGLN3Q9UI15 199 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 ZNF197O14709 1029 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 NOL4O94818 638 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 INPP1P49441 399 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 TDRD10Q5VZ19 366 aaKnown RBP15.24■□□□□ 0.03
PTPRU-205ENST00000460170 GALNT4Q8N4A0 578 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 ALG3Q92685 438 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 APOPT1Q96IL0 206 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 PURBQ96QR8 312 aaKnown RBP15.24■□□□□ 0.03
PTPRU-205ENST00000460170 PRDM4Q9UKN5 801 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 RUVBL2Q9Y230 463 aaKnown RBP15.24■□□□□ 0.03
PTPRU-205ENST00000460170 FSBPO95073 299 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 YY1P25490 414 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 THPOP40225 353 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 LAYNQ6UX15 382 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 IQCKQ8N0W5 287 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 L3MBTL3Q96JM7 780 aaPredicted RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 RPRD1AQ96P16 312 aaPredicted RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 TTYH3Q9C0H2 523 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 ASCC2Q9H1I8 757 aaPredicted RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 CASS4Q9NQ75 786 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 GID8Q9NWU2 228 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 CD274Q9NZQ7 290 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 CTNNAL1Q9UBT7 734 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 KCNH4Q9UQ05 1017 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 SIGLEC16A6NMB1 481 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 LYPLA2O95372 231 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 TWF1Q12792 350 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 LSM7Q9UK45 103 aaKnown RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 NFASCO94856 1347 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 TCHHQ07283 1943 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 NKRFO15226 690 aaKnown RBP eCLIP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 PLA2G6O60733 806 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 TOMM70O94826 608 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 RHOBTB1O94844 696 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 SEC24DO94855 1032 aaPredicted RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 CELF2O95319 508 aaKnown RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 HIST1H2AGP0C0S8 130 aaPredicted RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 UBTFL6P0CB48 400 aaPredicted RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 HIST1H2ADP20671 130 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 AVPR1AP37288 418 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 YWHAZP63104 245 aaKnown RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 SLC6A3Q01959 620 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 TIGD7Q6NT04 549 aaPredicted RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 CATSPERGQ6ZRH7 1159 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 STKLD1Q8NE28 680 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 HTR3CQ8WXA8 447 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 ART4Q93070 314 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 HIST1H2AHQ96KK5 128 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 HIST1H2AJQ99878 128 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 H2AFJQ9BTM1 129 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 IKZF4Q9H2S9 585 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 DRG1Q9Y295 367 aaKnown RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 E5RJQ4 531 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 GLRBP48167 497 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 NR2C2P49116 596 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 HARS2P49590 506 aaKnown RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 DPYSL3Q14195 570 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 MRNIPQ6NTE8 343 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 YTHDF3Q7Z739 585 aaKnown RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 ZNF75CPQ92670 426 aaPredicted RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 CCDC126Q96EE4 140 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 SRPK1Q96SB4 655 aaKnown RBP15.23■□□□□ 0.03
PTPRU-205ENST00000460170 TRPC7Q9HCX4 862 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 CHST12Q9NRB3 414 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 ACOT9Q9Y305 439 aa15.23■□□□□ 0.03
PTPRU-205ENST00000460170 FSCN2O14926 492 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 SUPT7LO94864 414 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 RGS2P41220 211 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 RTP1P59025 263 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 CNGA2Q16280 664 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 EFL1Q7Z2Z2 1120 aaKnown RBP15.22■□□□□ 0.03
PTPRU-205ENST00000460170 DCUN1D1Q96GG9 259 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 ASTN2O75129 1339 aaPredicted RBP15.22■□□□□ 0.03
PTPRU-205ENST00000460170 LTN1O94822 1766 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 SKAP2O75563 359 aaPredicted RBP15.22■□□□□ 0.03
PTPRU-205ENST00000460170 CYBBP04839 570 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 KRT16P08779 473 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 RGS4P49798 205 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 SHROOM1Q2M3G4 852 aaPredicted RBP15.22■□□□□ 0.03
PTPRU-205ENST00000460170 KBTBD12Q3ZCT8 623 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 SEL1L3Q68CR1 1132 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 CKAP2Q8WWK9 683 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 EFCAB1Q9HAE3 211 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 VANGL2Q9ULK5 521 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 ZCWPW2Q504Y3 356 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 SPDYAQ5MJ70 313 aa15.22■□□□□ 0.03
PTPRU-205ENST00000460170 PTRHD1Q6GMV3 140 aaKnown RBP15.22■□□□□ 0.03
PTPRU-205ENST00000460170 PHF13Q86YI8 300 aaPredicted RBP15.22■□□□□ 0.03
PTPRU-205ENST00000460170 GANCQ8TET4 914 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms