RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 HAPLN3Q96S86 360 aa3.92□□□□□ -1.78
VPS8-215ENST00000460158 DPCDQ9BVM2 203 aaPredicted RBP3.92□□□□□ -1.78
VPS8-215ENST00000460158 PTPRHQ9HD43 1115 aa3.92□□□□□ -1.78
VPS8-215ENST00000460158 ALG13Q9NP73 1137 aaKnown RBP3.92□□□□□ -1.78
VPS8-215ENST00000460158 NECTIN3Q9NQS3 549 aa3.92□□□□□ -1.78
VPS8-215ENST00000460158 SERTAD4Q9NUC0 356 aa3.92□□□□□ -1.78
VPS8-215ENST00000460158 DLL3Q9NYJ7 618 aa3.92□□□□□ -1.78
VPS8-215ENST00000460158 IGSF9Q9P2J2 1179 aa3.92□□□□□ -1.78
VPS8-215ENST00000460158 CCNL1Q9UK58 526 aaPredicted RBP3.92□□□□□ -1.78
VPS8-215ENST00000460158 SLC27A6Q9Y2P4 619 aa3.92□□□□□ -1.78
VPS8-215ENST00000460158 CLSPNQ9HAW4 1339 aa3.92□□□□□ -1.78
VPS8-215ENST00000460158 CCDC151A5D8V7 595 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 AQP12BA6NM10 295 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 PIP5K1BO14986 540 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 CCNT2O60583 730 aaKnown RBP3.91□□□□□ -1.78
VPS8-215ENST00000460158 SNX2O60749 519 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 TTLL1O95922 423 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 FGAP02671 866 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 EBLN1P0CF75 366 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 RBL1P28749 1068 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 CTGFP29279 349 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 PDIA3P30101 505 aaKnown RBP3.91□□□□□ -1.78
VPS8-215ENST00000460158 CXCR5P32302 372 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 CYP2C18P33260 490 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 HTR7P34969 479 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 TRAPPC10P48553 1259 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 RARRES1P49788 294 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 GPS1Q13098 491 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 RAPGEF1Q13905 1077 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 TRIM14Q14142 442 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 PUM3Q15397 648 aaKnown RBP3.91□□□□□ -1.78
VPS8-215ENST00000460158 MAPRE1Q15691 268 aaKnown RBP3.91□□□□□ -1.78
VPS8-215ENST00000460158 TUBB8Q3ZCM7 444 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 PGBD2Q6P3X8 592 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 Q6ZWC4 215 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 KRT73Q86Y46 540 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 MBD3L2Q8NHZ7 208 aaPredicted RBP3.91□□□□□ -1.78
VPS8-215ENST00000460158 SLC9A6Q92581 669 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 RSPRY1Q96DX4 576 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 PRR25Q96S07 402 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 OBP2BQ9NPH6 170 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 TMOD4Q9NZQ9 345 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 GABRQQ9UN88 632 aa3.91□□□□□ -1.78
VPS8-215ENST00000460158 COL15A1P39059 1388 aa3.9□□□□□ -1.78
VPS8-215ENST00000460158 GOLGA6L3A6NEY3 463 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 H0YIZ8 118 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 AP4M1O00189 453 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 PSMD9O00233 223 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 SPRY2O43597 315 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 ORC4O43929 436 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 PMPCBO75439 489 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 RHOBTB3O94955 611 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 PRKCBP05771 671 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 NDUFB7P17568 137 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 ENGP17813 658 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 SLC5A2P31639 672 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 GKP32189 559 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 TPTEP56180 551 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 E2F1Q01094 437 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 ICA1Q05084 483 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 GALNT1Q10472 559 aaPredicted RBP3.9□□□□□ -1.79
VPS8-215ENST00000460158 SPARCL1Q14515 664 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 ELF2Q15723 593 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 PFKFB4Q16877 469 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 DPY19L2P1Q6NXN4 242 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 OLFML1Q6UWY5 402 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 PARS2Q7L3T8 475 aaKnown RBP3.9□□□□□ -1.79
VPS8-215ENST00000460158 WDR53Q7Z5U6 358 aaPredicted RBP3.9□□□□□ -1.79
VPS8-215ENST00000460158 RAB11FIP4Q86YS3 637 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 FSTL5Q8N475 847 aaPredicted RBP3.9□□□□□ -1.79
VPS8-215ENST00000460158 C1orf131Q8NDD1 294 aaKnown RBP3.9□□□□□ -1.79
VPS8-215ENST00000460158 RP9Q8TA86 221 aaKnown RBP3.9□□□□□ -1.79
VPS8-215ENST00000460158 SUN3Q8TAQ9 357 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 CTHRC1Q96CG8 243 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 GRAMD1AQ96CP6 724 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 WDYHV1Q96HA8 205 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 LENG8Q96PV6 779 aaPredicted RBP3.9□□□□□ -1.79
VPS8-215ENST00000460158 IL17RBQ9NRM6 502 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 DUSP22Q9NRW4 184 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 LPAR3Q9UBY5 353 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 NRBP1Q9UHY1 535 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 TNFRSF18Q9Y5U5 241 aa3.9□□□□□ -1.79
VPS8-215ENST00000460158 POLR2AP24928 1970 aaKnown RBP3.89□□□□□ -1.79
VPS8-215ENST00000460158 OR2W5A6NFC9 320 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 LGALS16A8MUM7 142 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 NPC1O15118 1278 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 ZSCAN9O15535 394 aaPredicted RBP3.89□□□□□ -1.79
VPS8-215ENST00000460158 TCEA3O75764 348 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 PDE8BO95263 885 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 TNFRSF6BO95407 300 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 FAM163BP0C2L3 166 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 SRGAP2BP0DMP2 458 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 CD19P15391 556 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 ITPKBP27987 946 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 CCT8P50990 548 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 COL10A1Q03692 680 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 NSUN2Q08J23 767 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS8-215ENST00000460158 ATP1A4Q13733 1029 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 CLCA4Q14CN2 919 aa3.89□□□□□ -1.79
VPS8-215ENST00000460158 KRT72Q14CN4 511 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms