RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TTLL2Q9BWV7 592 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 NT5C1AQ9BXI3 368 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 DNAI2Q9GZS0 605 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 RNF38Q9H0F5 515 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 WNT6Q9Y6F9 365 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 DMXL1Q9Y485 3027 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 GVINP1Q7Z2Y8 2422 aa16.45■□□□□ 0.22
SDF4-204ENST00000459994 WDR87Q6ZQQ6 2873 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 ZNF292O60281 2723 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 ANTXRLA6NF34 631 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 PAEPP09466 180 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 CCDC172P0C7W6 258 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 KRT5P13647 590 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 FERP16591 822 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 NDST1P52848 882 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 RAD23BP54727 409 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 BPIFB4P59827 614 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 ZNF268Q14587 947 aaPredicted RBP16.44■□□□□ 0.22
SDF4-204ENST00000459994 MTF1Q14872 753 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 MAPRE1Q15691 268 aaKnown RBP16.44■□□□□ 0.22
SDF4-204ENST00000459994 SFMBT2Q5VUG0 894 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 ZC3H14Q6PJT7 736 aaKnown RBP16.44■□□□□ 0.22
SDF4-204ENST00000459994 ACOT1Q86TX2 421 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 CRYBG2Q8N1P7 616 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 TC2NQ8N9U0 490 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 RBBP8NLQ8NC74 664 aaPredicted RBP16.44■□□□□ 0.22
SDF4-204ENST00000459994 EZH1Q92800 747 aaPredicted RBP16.44■□□□□ 0.22
SDF4-204ENST00000459994 C8orf48Q96LL4 319 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 ELOVL4Q9GZR5 314 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 LINC00597Q9H2U6 94 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 KIF9Q9HAQ2 790 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 ZSCAN32Q9NX65 697 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 KIAA1257Q9ULG3 409 aa16.44■□□□□ 0.22
SDF4-204ENST00000459994 EP300Q09472 2414 aaPredicted RBP16.44■□□□□ 0.22
SDF4-204ENST00000459994 TRAV19A0A0A6YYK7 116 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 K7ESF4 209 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 SCAMP3O14828 347 aaKnown RBP16.43■□□□□ 0.22
SDF4-204ENST00000459994 TRIM66O15016 1216 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 BEST1O76090 585 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 CKMP06732 381 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 USP17L7P0C7H9 530 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 CCDC130P13994 396 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 ANXA13P27216 316 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 CLCN1P35523 988 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 USP8P40818 1118 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 PGFP49763 221 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 ADKP55263 362 aaKnown RBP16.43■□□□□ 0.22
SDF4-204ENST00000459994 CCDC173Q0VFZ6 552 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 SRSF5Q13243 272 aaKnown RBP16.43■□□□□ 0.22
SDF4-204ENST00000459994 TSR1Q2NL82 804 aaKnown RBP16.43■□□□□ 0.22
SDF4-204ENST00000459994 IRF2BP2Q7Z5L9 587 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 FAM35AQ86V20 835 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 ZMIZ2Q8NF64 920 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 SH3RF2Q8TEC5 729 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 MSANTD3Q96H12 275 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 TMEM176AQ96HP8 235 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 PANX2Q96RD6 677 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 TWNKQ96RR1 684 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 PPP1R9BQ96SB3 815 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 SEMA4AQ9H3S1 761 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 ABHD10Q9NUJ1 306 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 THG1LQ9NWX6 298 aaKnown RBP16.43■□□□□ 0.22
SDF4-204ENST00000459994 ZMYM5Q9UJ78 669 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 PCDHGA2Q9Y5H1 932 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 SPTBN4Q9H254 2564 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 GPR179Q6PRD1 2367 aa16.43■□□□□ 0.22
SDF4-204ENST00000459994 ZNF840PA6NDX5 716 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 SOBPA7XYQ1 873 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 CYP26A1O43174 497 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 GFPT2O94808 682 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 EGFP01133 1207 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 PNMA6AP0CW24 399 aaPredicted RBP16.42■□□□□ 0.22
SDF4-204ENST00000459994 HDCP19113 662 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 PRKCIP41743 596 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 PTK2Q05397 1052 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 TAF10Q12962 218 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 ASIC2Q16515 512 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 EML3Q32P44 896 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 E4F1Q66K89 784 aaPredicted RBP16.42■□□□□ 0.22
SDF4-204ENST00000459994 MAMSTRQ6ZN01 415 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 KIAA2013Q8IYS2 634 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 FUKQ8N0W3 1084 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 SLC4A11Q8NBS3 891 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 SCAMP5Q8TAC9 235 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 TNIP3Q96KP6 325 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 ZNHIT6Q9NWK9 470 aaKnown RBP16.42■□□□□ 0.22
SDF4-204ENST00000459994 DUS2Q9NX74 493 aaKnown RBP16.42■□□□□ 0.22
SDF4-204ENST00000459994 SPAG17Q6Q759 2223 aa16.42■□□□□ 0.22
SDF4-204ENST00000459994 CHURC1-FNTBB4DL54 471 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 LEFTY2O00292 366 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 TNFRSF10BO14763 440 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 OAS1P00973 400 aaKnown RBP16.41■□□□□ 0.22
SDF4-204ENST00000459994 VDRP11473 427 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 FECHP22830 423 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 GJA4P35212 333 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 CXCL12P48061 93 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 FNTBP49356 437 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 GALK1P51570 392 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 CCR3P51677 355 aa16.41■□□□□ 0.22
SDF4-204ENST00000459994 CDK17Q00537 523 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms