RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 DNAAF5Q86Y56 855 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 RFX6Q8HWS3 928 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 UNC45BQ8IWX7 931 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 KATNAL2Q8IYT4 538 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 DEFB106AQ8N104 65 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 EMC1Q8N766 993 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 ATP6V0D2Q8N8Y2 350 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 LRRC57Q8N9N7 239 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 KLHL23Q8NBE8 558 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 BBOF1Q8ND07 529 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 TEKT4Q8WW24 435 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 OVCA2Q8WZ82 227 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 TSC1Q92574 1164 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 RUBCNQ92622 972 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 P3H4Q92791 437 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 MAGOHBQ96A72 148 aaKnown RBP6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 RNF25Q96BH1 459 aaPredicted RBP6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 BTBD6Q96KE9 485 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 CFAP57Q96MR6 1250 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 EPAS1Q99814 870 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 TCF25Q9BQ70 676 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 DDX23Q9BUQ8 820 aaKnown RBP6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 ULBP1Q9BZM6 244 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 TSPYL1Q9H0U9 437 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLITRK6Q9H5Y7 841 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 L2HGDHQ9H9P8 463 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 PIDD1Q9HB75 910 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 TLR9Q9NR96 1032 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 DDIT4Q9NX09 232 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 NENFQ9UMX5 172 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 COG5Q9UP83 839 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 SCML2Q9UQR0 700 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 EFR3BQ9Y2G0 817 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 SLC27A5Q9Y2P5 690 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 PCDHA11Q9Y5I1 949 aa6.09□□□□□ -1.43
RNU1-88P-201ENST00000459274 VWA8A3KMH1 1905 aa6.09□□□□□ -1.44
RNU1-88P-201ENST00000459274 TSC2P49815 1807 aa6.09□□□□□ -1.44
RNU1-88P-201ENST00000459274 ALPK3Q96L96 1907 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 A0A0U1RQJ8 604 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 MTMR11A4FU01 709 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 C2CD4BA6NLJ0 364 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 DPYSL4O14531 572 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 APOL1O14791 398 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 NCAM2O15394 837 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 PAPSS1O43252 624 aaPredicted RBP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 TRUB2O95900 331 aaKnown RBP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 GLUD1P00367 558 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 OR4Q2P0C623 313 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 ITGB8P26012 769 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 MIPP30301 263 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 SERPINB6P35237 376 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 PBX3P40426 434 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 SLC11A2P49281 568 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 DAOAP59103 153 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 DR1Q01658 176 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 ROR1Q01973 937 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 RAB33AQ14088 237 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 DHX34Q14147 1143 aaKnown RBP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 HLTFQ14527 1009 aaKnown RBP eCLIP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 DDR2Q16832 855 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 RAB41Q5JT25 222 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 BRMS1LQ5PSV4 323 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 RTP2Q5QGT7 225 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 HECTD3Q5T447 861 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 SCARA3Q6AZY7 606 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 PM20D1Q6GTS8 502 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 OLFML1Q6UWY5 402 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 C4orf22Q6V702 233 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 RNF19BQ6ZMZ0 732 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 SYDE1Q6ZW31 735 aaPredicted RBP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 BEND5Q7L4P6 421 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 UBE2Q1Q7Z7E8 422 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 LRRTM3Q86VH5 581 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 VSIG1Q86XK7 387 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 KLHL7Q8IXQ5 586 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 CRIPAKQ8N1N5 446 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 GOLGA6L1Q8N7Z2 621 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 CCDC89Q8N998 374 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 ATAD1Q8NBU5 361 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 LEMD2Q8NC56 503 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 SPATA4Q8NEY3 305 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 OR10T2Q8NGX3 314 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 NSMCE1Q8WV22 266 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 ATRIPQ8WXE1 791 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 RSAD2Q8WXG1 361 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 MRPS31Q92665 395 aaKnown RBP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 CLP1Q92989 425 aaKnown RBP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 B3GALT6Q96L58 329 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 SMOQ99835 787 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 LPIN3Q9BQK8 851 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 OSBPL8Q9BZF1 889 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 PLEKHA4Q9H4M7 779 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 DHX35Q9H5Z1 703 aaKnown RBP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 CATSPERBQ9H7T0 1116 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 CHST7Q9NS84 486 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 MARCH5Q9NX47 278 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 CLIC5Q9NZA1 410 aa6.08□□□□□ -1.44
RNU1-88P-201ENST00000459274 MTRF1LQ9UGC7 380 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms