RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 DYNLT1P63172 113 aa8.83□□□□□ -1
VPS50-208ENST00000458707 BST1Q10588 318 aa8.83□□□□□ -1
VPS50-208ENST00000458707 GRM1Q13255 1194 aa8.83□□□□□ -1
VPS50-208ENST00000458707 HADHQ16836 314 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 ZBTB41Q5SVQ8 909 aa8.83□□□□□ -1
VPS50-208ENST00000458707 C6orf163Q5TEZ5 329 aa8.83□□□□□ -1
VPS50-208ENST00000458707 WDR78Q5VTH9 848 aa8.83□□□□□ -1
VPS50-208ENST00000458707 GPAT2Q6NUI2 795 aa8.83□□□□□ -1
VPS50-208ENST00000458707 AAGABQ6PD74 315 aa8.83□□□□□ -1
VPS50-208ENST00000458707 THSD4Q6ZMP0 1018 aa8.83□□□□□ -1
VPS50-208ENST00000458707 RIPOR1Q6ZS17 1223 aa8.83□□□□□ -1
VPS50-208ENST00000458707 CDHR3Q6ZTQ4 885 aa8.83□□□□□ -1
VPS50-208ENST00000458707 ULK2Q8IYT8 1036 aa8.83□□□□□ -1
VPS50-208ENST00000458707 ZNF454Q8N9F8 522 aa8.83□□□□□ -1
VPS50-208ENST00000458707 CMASQ8NFW8 434 aaPredicted RBP8.83□□□□□ -1
VPS50-208ENST00000458707 FBXO27Q8NI29 283 aa8.83□□□□□ -1
VPS50-208ENST00000458707 LPAR1Q92633 364 aa8.83□□□□□ -1
VPS50-208ENST00000458707 BHMTQ93088 406 aa8.83□□□□□ -1
VPS50-208ENST00000458707 ZBTB45Q96K62 511 aaPredicted RBP8.83□□□□□ -1
VPS50-208ENST00000458707 SYT17Q9BSW7 474 aa8.83□□□□□ -1
VPS50-208ENST00000458707 FRMD8Q9BZ67 464 aaPredicted RBP8.83□□□□□ -1
VPS50-208ENST00000458707 IMPG2Q9BZV3 1241 aa8.83□□□□□ -1
VPS50-208ENST00000458707 C10orf88Q9H8K7 445 aa8.83□□□□□ -1
VPS50-208ENST00000458707 RAVER2Q9HCJ3 691 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 ZDHHC7Q9NXF8 308 aa8.83□□□□□ -1
VPS50-208ENST00000458707 IL1RAPL1Q9NZN1 696 aa8.83□□□□□ -1
VPS50-208ENST00000458707 SEPT9Q9UHD8 586 aaPredicted RBP8.83□□□□□ -1
VPS50-208ENST00000458707 SORCS3Q9UPU3 1222 aa8.83□□□□□ -1
VPS50-208ENST00000458707 TTLL3Q9Y4R7 772 aa8.83□□□□□ -1
VPS50-208ENST00000458707 ZNF638Q14966 1978 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 YDJCA8MPS7 323 aa8.83□□□□□ -1
VPS50-208ENST00000458707 SPECC1L-ADORA2AF8WAN1 911 aa8.83□□□□□ -1
VPS50-208ENST00000458707 TRDMT1O14717 391 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 BUD23O43709 281 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 CIB2O75838 187 aa8.83□□□□□ -1
VPS50-208ENST00000458707 STAM2O75886 525 aa8.83□□□□□ -1
VPS50-208ENST00000458707 KRT37O76014 449 aa8.83□□□□□ -1
VPS50-208ENST00000458707 ENDOD1O94919 500 aa8.83□□□□□ -1
VPS50-208ENST00000458707 ENO1P06733 434 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 SNRPAP09012 282 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 PRKCHP24723 683 aa8.83□□□□□ -1
VPS50-208ENST00000458707 NAMPTP43490 491 aa8.83□□□□□ -1
VPS50-208ENST00000458707 APLP1P51693 650 aa8.83□□□□□ -1
VPS50-208ENST00000458707 EIF3EP60228 445 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 TGFB2P61812 414 aa8.83□□□□□ -1
VPS50-208ENST00000458707 BASP1P80723 227 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 MRPS5P82675 430 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 PRKCEQ02156 737 aa8.83□□□□□ -1
VPS50-208ENST00000458707 DYNC1I2Q13409 638 aaKnown RBP8.83□□□□□ -1
VPS50-208ENST00000458707 EMC2Q15006 297 aa8.83□□□□□ -1
VPS50-208ENST00000458707 ARHGEF16Q5VV41 709 aa8.83□□□□□ -1
VPS50-208ENST00000458707 CES4AQ5XG92 561 aa8.83□□□□□ -1
VPS50-208ENST00000458707 STYK1Q6J9G0 422 aa8.83□□□□□ -1
VPS50-208ENST00000458707 SWSAP1Q6NVH7 229 aa8.83□□□□□ -1
VPS50-208ENST00000458707 ABHD15Q6UXT9 468 aa8.83□□□□□ -1
VPS50-208ENST00000458707 CCNJLQ8IV13 435 aa8.83□□□□□ -1
VPS50-208ENST00000458707 WDR49Q8IV35 697 aa8.83□□□□□ -1
VPS50-208ENST00000458707 CCDC60Q8IWA6 550 aaPredicted RBP8.83□□□□□ -1
VPS50-208ENST00000458707 KIAA0319LQ8IZA0 1049 aa8.83□□□□□ -1
VPS50-208ENST00000458707 CPXCR1Q8N123 301 aa8.83□□□□□ -1
VPS50-208ENST00000458707 PPP2R3CQ969Q6 453 aa8.83□□□□□ -1
VPS50-208ENST00000458707 E2F7Q96AV8 911 aa8.83□□□□□ -1
VPS50-208ENST00000458707 GBP5Q96PP8 586 aa8.83□□□□□ -1
VPS50-208ENST00000458707 GORASP1Q9BQQ3 440 aa8.83□□□□□ -1
VPS50-208ENST00000458707 SIKE1Q9BRV8 207 aa8.83□□□□□ -1
VPS50-208ENST00000458707 MSTO1Q9BUK6 570 aa8.83□□□□□ -1
VPS50-208ENST00000458707 PPP1R12CQ9BZL4 782 aa8.83□□□□□ -1
VPS50-208ENST00000458707 CRISPLD2Q9H0B8 497 aa8.83□□□□□ -1
VPS50-208ENST00000458707 LHX5Q9H2C1 402 aa8.83□□□□□ -1
VPS50-208ENST00000458707 DMAP1Q9NPF5 467 aaPredicted RBP8.83□□□□□ -1
VPS50-208ENST00000458707 CISHQ9NSE2 258 aa8.83□□□□□ -1
VPS50-208ENST00000458707 NDE1Q9NXR1 346 aa8.83□□□□□ -1
VPS50-208ENST00000458707 STK32BQ9NY57 414 aa8.83□□□□□ -1
VPS50-208ENST00000458707 SLC9A2Q9UBY0 812 aa8.83□□□□□ -1
VPS50-208ENST00000458707 SLC7A8Q9UHI5 535 aa8.83□□□□□ -1
VPS50-208ENST00000458707 PGAP2Q9UHJ9 254 aa8.83□□□□□ -1
VPS50-208ENST00000458707 SLC4A7Q9Y6M7 1214 aa8.83□□□□□ -1
VPS50-208ENST00000458707 MYO18AQ92614 2054 aaKnown RBP8.82□□□□□ -1
VPS50-208ENST00000458707 CLRN2A0PK11 232 aa8.82□□□□□ -1
VPS50-208ENST00000458707 TRIM49D1C9J1S8 452 aa8.82□□□□□ -1
VPS50-208ENST00000458707 MCF2LO15068 1137 aa8.82□□□□□ -1
VPS50-208ENST00000458707 BIRC5O15392 142 aa8.82□□□□□ -1
VPS50-208ENST00000458707 RFPL1O75677 317 aa8.82□□□□□ -1
VPS50-208ENST00000458707 RNF8O76064 485 aa8.82□□□□□ -1
VPS50-208ENST00000458707 CST3P01034 146 aaPredicted RBP8.82□□□□□ -1
VPS50-208ENST00000458707 SERPINA6P08185 405 aa8.82□□□□□ -1
VPS50-208ENST00000458707 CD48P09326 243 aa8.82□□□□□ -1
VPS50-208ENST00000458707 WEE2P0C1S8 567 aa8.82□□□□□ -1
VPS50-208ENST00000458707 RBP3P10745 1247 aa8.82□□□□□ -1
VPS50-208ENST00000458707 KRT3P12035 628 aa8.82□□□□□ -1
VPS50-208ENST00000458707 AOC1P19801 751 aa8.82□□□□□ -1
VPS50-208ENST00000458707 HMGB2P26583 209 aaKnown RBP8.82□□□□□ -1
VPS50-208ENST00000458707 CCND2P30279 289 aa8.82□□□□□ -1
VPS50-208ENST00000458707 POLR2BP30876 1174 aaKnown RBP8.82□□□□□ -1
VPS50-208ENST00000458707 ARL2P36404 184 aa8.82□□□□□ -1
VPS50-208ENST00000458707 CPOXP36551 454 aa8.82□□□□□ -1
VPS50-208ENST00000458707 MAGEA6P43360 314 aa8.82□□□□□ -1
VPS50-208ENST00000458707 RANBP1P43487 201 aa8.82□□□□□ -1
VPS50-208ENST00000458707 CPA2P48052 419 aa8.82□□□□□ -1
VPS50-208ENST00000458707 CDK7P50613 346 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms