RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 STK38Q15208 465 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 ANO4Q32M45 955 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 ZNF699Q32M78 642 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 HTR3DQ70Z44 454 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 MIB1Q86YT6 1006 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 HDDC3Q8N4P3 179 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 NAT16Q8N8M0 369 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 IQUBQ8NA54 791 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 ZMIZ2Q8NF64 920 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 PARD3BQ8TEW8 1205 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 GABRG3Q99928 467 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 FBXO44Q9H4M3 255 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 CYLDQ9NQC7 956 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 KRT82Q9NSB4 513 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 DNAAF2Q9NVR5 837 aaKnown RBP11.04□□□□□ -0.64
HDLBP-227ENST00000458564 CHORDC1Q9UHD1 332 aaPredicted RBP11.04□□□□□ -0.64
HDLBP-227ENST00000458564 LOC400499M0QZD8 3231 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 CELSR3Q9NYQ7 3312 aa11.04□□□□□ -0.64
HDLBP-227ENST00000458564 FASNP49327 2511 aaKnown RBP11.03□□□□□ -0.64
HDLBP-227ENST00000458564 SPAARA0A1B0GVQ0 90 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 A0A1W2PQD8 194 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 GFRA2O00451 464 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 ARHGAP33O14559 1287 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 STX6O43752 255 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 OPHN1O60890 802 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 AP1G2O75843 785 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 YEATS4O95619 227 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 NDUFV2P19404 249 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 CDH8P55286 799 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 SLC14A1Q13336 389 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 NCOA4Q13772 614 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 KNOP1Q1ED39 458 aaKnown RBP11.03□□□□□ -0.64
HDLBP-227ENST00000458564 ZNF423Q2M1K9 1284 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 ZNF667Q5HYK9 610 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 EGFLAMQ63HQ2 1017 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 GRAMD4Q6IC98 578 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 KIAA1211LQ6NV74 962 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 KLHDC10Q6PID8 442 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 SHC4Q6S5L8 630 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 SLC41A1Q8IVJ1 513 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 NELFCDQ8IXH7 590 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 MINDY1Q8N5J2 469 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 GOLGA5Q8TBA6 731 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 PLEKHO2Q8TD55 490 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 IPO4Q8TEX9 1081 aaKnown RBP11.03□□□□□ -0.64
HDLBP-227ENST00000458564 WBP2Q969T9 261 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 DHX58Q96C10 678 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 XPO6Q96QU8 1125 aaKnown RBP11.03□□□□□ -0.64
HDLBP-227ENST00000458564 SMOQ99835 787 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 MED10Q9BTT4 135 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
HDLBP-227ENST00000458564 NACA2Q9H009 215 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 SDCBP2Q9H190 292 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 TLR8Q9NR97 1041 aaKnown RBP11.03□□□□□ -0.64
HDLBP-227ENST00000458564 DNAJC17Q9NVM6 304 aaKnown RBP11.03□□□□□ -0.64
HDLBP-227ENST00000458564 WDR35Q9P2L0 1181 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 TFIP11Q9UBB9 837 aaKnown RBP11.03□□□□□ -0.64
HDLBP-227ENST00000458564 KLK13Q9UKR3 277 aa11.03□□□□□ -0.64
HDLBP-227ENST00000458564 SMG1Q96Q15 3661 aaKnown RBP11.03□□□□□ -0.64
HDLBP-227ENST00000458564 PVALEFA0A1B0GWK0 134 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 LRRIQ3A6PVS8 624 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-227ENST00000458564 TRIM24O15164 1050 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 ZBTB24O43167 697 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-227ENST00000458564 EXOC3O60645 756 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 CUTAO60888 179 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 PHACTR2O75167 634 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 GJB3O75712 270 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 BEST1O76090 585 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 VNN1O95497 513 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 C4BPAP04003 597 aaKnown RBP11.02□□□□□ -0.65
HDLBP-227ENST00000458564 SYPP08247 313 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 IRF1P10914 325 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 P4HA1P13674 534 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 CD59P13987 128 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 TYRP14679 529 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 RDXP35241 583 aaKnown RBP11.02□□□□□ -0.65
HDLBP-227ENST00000458564 CASP4P49662 377 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 PGFP49763 221 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 GOLGA8FQ08AF8 430 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 GOLGA8DPQ0D2H9 430 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 BIRC3Q13489 604 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 RAB44Q7Z6P3 723 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-227ENST00000458564 ACOT1Q86TX2 421 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 UNC93AQ86WB7 457 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 SLC9A9Q8IVB4 645 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 CHPFQ8IZ52 775 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 CRYBG2Q8N1P7 616 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 ZNF419Q96HQ0 510 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-227ENST00000458564 HSPA12BQ96MM6 686 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 ACOX2Q99424 681 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 GTPBP2Q9BX10 602 aaKnown RBP11.02□□□□□ -0.65
HDLBP-227ENST00000458564 BBS2Q9BXC9 721 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 FAM124BQ9H5Z6 455 aaPredicted RBP11.02□□□□□ -0.65
HDLBP-227ENST00000458564 PNPLA8Q9NP80 782 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 FSCN3Q9NQT6 498 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
HDLBP-227ENST00000458564 DMAC2Q9NW81 257 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 SUSD2Q9UGT4 822 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 SCML2Q9UQR0 700 aa11.02□□□□□ -0.65
HDLBP-227ENST00000458564 NFE2L3Q9Y4A8 694 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms