RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 AJAP1Q9UKB5 411 aaPredicted RBP19.63■□□□□ 0.73
USP39-209ENST00000458268 USP3Q9Y6I4 520 aa19.63■□□□□ 0.73
USP39-209ENST00000458268 EGFP01133 1207 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 EEF1GP26641 437 aaKnown RBP19.62■□□□□ 0.73
USP39-209ENST00000458268 RPS9P46781 194 aaKnown RBP19.62■□□□□ 0.73
USP39-209ENST00000458268 PSEN1P49768 467 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 GALK1P51570 392 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 ZNF132P52740 706 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 MLLT6P55198 1093 aaPredicted RBP19.62■□□□□ 0.73
USP39-209ENST00000458268 TYRO3Q06418 890 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 STILQ15468 1287 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 CNGA2Q16280 664 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 CT47A1Q5JQC4 288 aaPredicted RBP19.62■□□□□ 0.73
USP39-209ENST00000458268 FSTL4Q6MZW2 842 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 DENND1BQ6P3S1 775 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 ENOSF1Q7L5Y1 443 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 TADA2BQ86TJ2 420 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 ARHGAP18Q8N392 663 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 EDEM1Q92611 657 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 CD101Q93033 1021 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 CHRDQ9H2X0 955 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 CYLDQ9NQC7 956 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 FANCLQ9NW38 375 aa19.62■□□□□ 0.73
USP39-209ENST00000458268 E2F8A0AVK6 867 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 FAM170AA1A519 330 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 GTPBP10A4D1E9 387 aaKnown RBP19.61■□□□□ 0.73
USP39-209ENST00000458268 SP9P0CG40 484 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 PLA2G4AP47712 749 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 KDSRQ06136 332 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 DHCR24Q15392 516 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 ANO4Q32M45 955 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 RAB41Q5JT25 222 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 DGKKQ5KSL6 1271 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 LY6G5CQ5SRR4 150 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 PMF1Q6P1K2 205 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 PASD1Q8IV76 773 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 ZNF687Q8N1G0 1237 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 AOPEPQ8N6M6 819 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 NAT16Q8N8M0 369 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 RNF139Q8WU17 664 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 EXOC4Q96A65 974 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 FAM81BQ96LP2 452 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 PCMTD1Q96MG8 357 aaPredicted RBP19.61■□□□□ 0.73
USP39-209ENST00000458268 KLF16Q9BXK1 252 aaPredicted RBP19.61■□□□□ 0.73
USP39-209ENST00000458268 UBXN6Q9BZV1 441 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 FBRSL1Q9HCM7 1045 aaKnown RBP19.61■□□□□ 0.73
USP39-209ENST00000458268 SIX2Q9NPC8 291 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 TBC1D14Q9P2M4 693 aa19.61■□□□□ 0.73
USP39-209ENST00000458268 SLC12A8A0AV02 714 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 MED7O43513 233 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 ADH1CP00326 375 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 ADH5P11766 374 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 CDK11BP21127 795 aaKnown RBP19.6■□□□□ 0.73
USP39-209ENST00000458268 SEC13P55735 322 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 SATB1Q01826 763 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 MYL5Q02045 173 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 KRT31Q15323 416 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 ANO6Q4KMQ2 910 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 TPGS1Q6ZTW0 290 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 ANKRD20A12PQ8NF67 263 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 CLEC4CQ8WTT0 213 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 BHMTQ93088 406 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 CLIC5Q9NZA1 410 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 STRIP2Q9ULQ0 834 aa19.6■□□□□ 0.73
USP39-209ENST00000458268 YJEFN3A6XGL0 299 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 BECN2A8MW95 431 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 E7ENQ6 273 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 RNF40O75150 1001 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 MRE11P49959 708 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 GAS6Q14393 721 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 PKDCCQ504Y2 493 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 TMEM196Q5HYL7 178 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 FKBP15Q5T1M5 1219 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 HEATR6Q6AI08 1181 aaKnown RBP19.59■□□□□ 0.73
USP39-209ENST00000458268 MAML2Q8IZL2 1156 aaPredicted RBP19.59■□□□□ 0.73
USP39-209ENST00000458268 ADGRG2Q8IZP9 1017 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 GOLGA1Q92805 767 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 CDK5RAP1Q96SZ6 601 aaKnown RBP19.59■□□□□ 0.73
USP39-209ENST00000458268 PDCL3Q9H2J4 239 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 MARCH2Q9P0N8 246 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 FHOD1Q9Y613 1164 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 CACNA1HO95180 2353 aa19.59■□□□□ 0.73
USP39-209ENST00000458268 TRDMT1O14717 391 aaKnown RBP19.58■□□□□ 0.72
USP39-209ENST00000458268 CXCL12P48061 93 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 SLC6A11P48066 632 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 KLK7P49862 253 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 CCR3P51677 355 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 DAOAP59103 153 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 KCNMA1Q12791 1236 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 CCINQ13939 588 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 CDKAL1Q5VV42 579 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 PKN3Q6P5Z2 889 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 RHBDF2Q6PJF5 856 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 SLC35F5Q8WV83 523 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 ZNF606Q8WXB4 792 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 KCTD13Q8WZ19 329 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 SHC3Q92529 594 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 FAM149B1Q96BN6 582 aa19.58■□□□□ 0.72
USP39-209ENST00000458268 NEDD8-MDP1E9PL57 170 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 FOXN3O00409 490 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms