RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ATP5C1P36542 298 aaKnown RBP22.75■■□□□ 1.23
CPNE1-220ENST00000458038 NDST1P52848 882 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 LYSMD4Q5XG99 296 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 SDE2Q6IQ49 451 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 RABEPKQ7Z6M1 372 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 TMEFF1Q8IYR6 380 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 NAT16Q8N8M0 369 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 ZMIZ2Q8NF64 920 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 CEP76Q8TAP6 659 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 SLC2A14Q8TDB8 520 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 KCTD10Q9H3F6 313 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 PNPLA8Q9NP80 782 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 CYLDQ9NQC7 956 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 LSM7Q9UK45 103 aaKnown RBP22.75■■□□□ 1.23
CPNE1-220ENST00000458038 SCML2Q9UQR0 700 aa22.75■■□□□ 1.23
CPNE1-220ENST00000458038 MAPK13O15264 365 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 KIF20AO95235 890 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 PROS1P07225 676 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 FAM200BP0CF97 657 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 MAP3K7CLP57077 242 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 ZNF252P-AS1Q0IIN9 211 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 C10orf76Q5T2E6 689 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 FOXD4L5Q5VV16 416 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-220ENST00000458038 GRAMD4Q6IC98 578 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 KLHDC10Q6PID8 442 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 SLC23A3Q6PIS1 610 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 SV2AQ7L0J3 742 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 KIAA0895Q8NCT3 520 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 FOXD4L4Q8WXT5 416 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-220ENST00000458038 PAGE5Q96GU1 130 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 HNRNPABQ99729 332 aaKnown RBP22.74■■□□□ 1.23
CPNE1-220ENST00000458038 KLF16Q9BXK1 252 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-220ENST00000458038 IMPG2Q9BZV3 1241 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.74■■□□□ 1.231e-6■■■■■ 61.4
CPNE1-220ENST00000458038 SERTAD1Q9UHV2 236 aa22.74■■□□□ 1.23
CPNE1-220ENST00000458038 MBD1Q9UIS9 605 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-220ENST00000458038 GIPC1O14908 333 aa22.73■■□□□ 1.23
CPNE1-220ENST00000458038 CACNG3O60359 315 aa22.73■■□□□ 1.23
CPNE1-220ENST00000458038 ZNF217O75362 1048 aa22.73■■□□□ 1.23
CPNE1-220ENST00000458038 NR3C1P04150 777 aa22.73■■□□□ 1.23
CPNE1-220ENST00000458038 CCDC130P13994 396 aa22.73■■□□□ 1.23
CPNE1-220ENST00000458038 FOXD4L6Q3SYB3 417 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-220ENST00000458038 PEAR1Q5VY43 1037 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-220ENST00000458038 FOXD4L3Q6VB84 417 aaPredicted RBP22.73■■□□□ 1.23
CPNE1-220ENST00000458038 GRAMD1CQ8IYS0 662 aa22.73■■□□□ 1.23
CPNE1-220ENST00000458038 SLC32A1Q9H598 525 aa22.73■■□□□ 1.23
CPNE1-220ENST00000458038 CYP3A43Q9HB55 503 aa22.73■■□□□ 1.23
CPNE1-220ENST00000458038 MARK1Q9P0L2 795 aa22.73■■□□□ 1.23
CPNE1-220ENST00000458038 PILRBQ9UKJ0 227 aa22.73■■□□□ 1.23
CPNE1-220ENST00000458038 PCDHA5Q9Y5H7 936 aa22.73■■□□□ 1.23
CPNE1-220ENST00000458038 FAM208BQ5VWN6 2430 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 ACTN4O43707 911 aaKnown RBP22.72■■□□□ 1.23
CPNE1-220ENST00000458038 CALUO43852 315 aaPredicted RBP22.72■■□□□ 1.23
CPNE1-220ENST00000458038 BEST1O76090 585 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 IRF1P10914 325 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 HOXB2P14652 356 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 PTGER3P43115 390 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 PSEN1P49768 467 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 DLG4P78352 724 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 ENPEPQ07075 957 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 INCA1Q0VD86 236 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 DUOXA1Q1HG43 343 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 KMT5BQ4FZB7 885 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 TADA2BQ86TJ2 420 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 ZNF276Q8N554 614 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 DNAJC17Q9NVM6 304 aaKnown RBP22.72■■□□□ 1.23
CPNE1-220ENST00000458038 CACNA1EQ15878 2313 aa22.72■■□□□ 1.23
CPNE1-220ENST00000458038 UPK3BL1B0FP48 263 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 UPK3BL2E5RIL1 263 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 GREM1O60565 184 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 HLA-DRAP01903 254 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 GABRG2P18507 467 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 PIK3CAP42336 1068 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 ASPAP45381 313 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 PLA2G4AP47712 749 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 UAP1L1Q3KQV9 507 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 CEP135Q66GS9 1140 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 HSCBQ8IWL3 235 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 C12orf29Q8N999 325 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 CCDC47Q96A33 483 aaKnown RBP22.71■■□□□ 1.23
CPNE1-220ENST00000458038 CYFIP2Q96F07 1278 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 BBS2Q9BXC9 721 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 NT5C1AQ9BXI3 368 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 FAM49BQ9NUQ9 324 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 TMEM74BQ9NUR3 256 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 DNMT3LQ9UJW3 386 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 SLC6A14Q9UN76 642 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 TRAF3IP3Q9Y228 551 aa22.71■■□□□ 1.23
CPNE1-220ENST00000458038 NEDD8-MDP1E9PL57 170 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 GFRA2O00451 464 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 TYRP14679 529 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 ENGP17813 658 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 CMA1P23946 247 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 VAMP7P51809 220 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 RPL6Q02878 288 aaKnown RBP22.7■■□□□ 1.22
CPNE1-220ENST00000458038 NFIL3Q16649 462 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 CLEC20AQ6ZU45 233 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 ARMCX6Q7L4S7 300 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 FRMD1Q8N878 549 aa22.7■■□□□ 1.22
CPNE1-220ENST00000458038 WBP2Q969T9 261 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms