RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SMOQ99835 787 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 NT5C1AQ9BXI3 368 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 NIF3L1Q9GZT8 377 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 FBXO44Q9H4M3 255 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 COMMD8Q9NX08 183 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 DMXL2Q8TDJ6 3036 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 TNFRSF10BO14763 440 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 APODP05090 189 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 EPB41P11171 864 aaKnown RBP16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 MAPK8P45983 427 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 DHPSP49366 369 aaPredicted RBP16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 PPP3CAQ08209 521 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 PNOCQ13519 176 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 ANO7Q6IWH7 933 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 ARMCX6Q7L4S7 300 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 CRYBG2Q8N1P7 616 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 CCDC33Q8N5R6 958 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 KIAA1958Q8N8K9 716 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 PNKPQ96T60 521 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 CYP3A43Q9HB55 503 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 TMEM8AQ9HCN3 771 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 TLR8Q9NR97 1041 aaKnown RBP16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 RMND1Q9NWS8 449 aa16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 ATXN2Q99700 1313 aaKnown RBP16.64■□□□□ 0.25
CHCHD3-204ENST00000457942 E2F8A0AVK6 867 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 ANTXRLA6NF34 631 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 KHNYNO15037 678 aaKnown RBP16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 TLR5O60602 858 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 BEST1O76090 585 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 MXI1P50539 228 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 TUBP50607 506 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 INCA1Q0VD86 236 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 ANO4Q32M45 955 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 LY6G5CQ5SRR4 150 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 BTBD8Q5XKL5 378 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 KRT39Q6A163 491 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 ADGRG2Q8IZP9 1017 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 ZMIZ2Q8NF64 920 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 USP33Q8TEY7 942 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 CYFIP2Q96F07 1278 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 EEF2KMTQ96G04 330 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 TWNKQ96RR1 684 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 TSG101Q99816 390 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 APOBEC3GQ9HC16 384 aaKnown RBP16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 ARHGEF4Q9NR80 690 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 KLK13Q9UKR3 277 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 FREM2Q5SZK8 3169 aa16.63■□□□□ 0.25
CHCHD3-204ENST00000457942 K7EQS6 105 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 CDX4O14627 284 aaPredicted RBP16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 CETN3O15182 167 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 CYP26A1O43174 497 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 STX10O60499 249 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 KAT7O95251 611 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 ACO1P21399 889 aaKnown RBP16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 SLC6A11P48066 632 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 GAD2Q05329 585 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 GOLGA8FQ08AF8 430 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 GOLGA8DPQ0D2H9 430 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 GAB4Q2WGN9 574 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 EDRF1Q3B7T1 1238 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 ZNF394Q53GI3 561 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 DCAF17Q5H9S7 520 aaPredicted RBP16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 TCERG1LQ5VWI1 586 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 SNX30Q5VWJ9 437 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 PMS2CLQ68D20 193 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 RHBDF2Q6PJF5 856 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 CLEC20AQ6ZU45 233 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 C12orf40Q86WS4 652 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 PIGKQ92643 395 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 OTUB2Q96DC9 234 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 HNRNPABQ99729 332 aaKnown RBP16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 CSNK1G1Q9HCP0 422 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 IL37Q9NZH6 218 aa16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 LSM7Q9UK45 103 aaKnown RBP16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 FASNP49327 2511 aaKnown RBP16.62■□□□□ 0.25
CHCHD3-204ENST00000457942 SPAARA0A1B0GVQ0 90 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 TMEM8BA6NDV4 472 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 CILPO75339 1184 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 ALDH1A2O94788 518 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 ZDHHC11BP0C7U3 371 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 TIE1P35590 1138 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 EIF2DP41214 584 aaKnown RBP16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 IRX4P78413 519 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 MRPS21P82921 87 aaKnown RBP16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 ENPEPQ07075 957 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 ZCWPW2Q504Y3 356 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 GPRIN1Q7Z2K8 1008 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 BBS7Q8IWZ6 715 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 ALLCQ8N6M5 410 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 NAT16Q8N8M0 369 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 ZFRQ96KR1 1074 aaKnown RBP16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 FSCN3Q9NQT6 498 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 BCCIPQ9P287 314 aaKnown RBP eCLIP16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 MMP17Q9ULZ9 603 aa16.61■□□□□ 0.25
CHCHD3-204ENST00000457942 NUP205Q92621 2012 aa16.6■□□□□ 0.25
CHCHD3-204ENST00000457942 FAM92AA1XBS5 289 aa16.6■□□□□ 0.25
CHCHD3-204ENST00000457942 SMC2O95347 1197 aa16.6■□□□□ 0.25
CHCHD3-204ENST00000457942 KLF8O95600 359 aaPredicted RBP16.6■□□□□ 0.25
CHCHD3-204ENST00000457942 CEACAM1P13688 526 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms