RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SPATA4Q8NEY3 305 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 GIPC2Q8TF65 315 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 FAM172AQ8WUF8 416 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 LRRN4Q8WUT4 740 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 ATG4AQ8WYN0 398 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 CENPIQ92674 756 aaPredicted RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 CLP1Q92989 425 aaKnown RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 SLITRK1Q96PX8 696 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 CNPY3Q9BT09 278 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 SNRNP25Q9BV90 132 aaKnown RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 HEMGNQ9BXL5 484 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 LRRC4Q9HBW1 653 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 ALG13Q9NP73 1137 aaKnown RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 NGRNQ9NPE2 291 aaKnown RBP9.14□□□□□ -0.95
RIF1-208ENST00000457745 PIGVQ9NUD9 493 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 MTMR10Q9NXD2 777 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 SPG21Q9NZD8 308 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 GMIPQ9P107 970 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 BACE2Q9Y5Z0 518 aa9.14□□□□□ -0.95
RIF1-208ENST00000457745 SYNJ2BP-COX16A0A087WUM0 186 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 A0A1W2PQH9 124 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 HIDE1A8MVS5 230 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 MIF4GDA9UHW6 222 aaKnown RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 GRM6O15303 877 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 TEX28O15482 410 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 MSI1O43347 362 aaKnown RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 TRAPPC3O43617 180 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 EFCAB14O75071 495 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 ZMYND10O75800 440 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 ZBED1O96006 694 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 RHOXF2BP0C7M4 288 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 MYBL2P10244 700 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 RALAP11233 206 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 CAPN2P17655 700 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 PAX3P23760 479 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 IL4RP24394 825 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 SCNN1AP37088 669 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 GRIK1P39086 918 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 PTPN9P43378 593 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 ACADSBP45954 432 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 SULT1E1P49888 294 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 KLF1Q13351 362 aaPredicted RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 TAZQ16635 292 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 USP41Q3LFD5 358 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 PM20D1Q6GTS8 502 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 PPP1R2P3Q6NXS1 205 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 SPOCD1Q6ZMY3 1216 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 ANKS3Q6ZW76 656 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 B4GALNT4Q76KP1 1039 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 FAM131BQ86XD5 332 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 KLHL7Q8IXQ5 586 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 GSPT2Q8IYD1 628 aaKnown RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 KATNAL2Q8IYT4 538 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 DCP1BQ8IZD4 617 aaKnown RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 SIX6OS1Q8N1H7 587 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 FIBCD1Q8N539 461 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 ACTRT1Q8TDG2 376 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 DQX1Q8TE96 717 aaKnown RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 DPF3Q92784 378 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 NT5C3BQ969T7 300 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 WBP2Q969T9 261 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 FAM149B1Q96BN6 582 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 PBKQ96KB5 322 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 C8orf48Q96LL4 319 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 KCTD15Q96SI1 283 aaPredicted RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 SEPT5Q99719 369 aaPredicted RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 RHOXF2Q9BQY4 288 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 LRRC1Q9BTT6 524 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 UBXN6Q9BZV1 441 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 DDX47Q9H0S4 455 aaKnown RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 CARD9Q9H257 536 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 C10orf88Q9H8K7 445 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 ZNF334Q9HCZ1 680 aaPredicted RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 WDR6Q9NNW5 1121 aaKnown RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 CYLDQ9NQC7 956 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.13□□□□□ -0.95
RIF1-208ENST00000457745 IL37Q9NZH6 218 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 COX16Q9P0S2 106 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 PRKAG2Q9UGJ0 569 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 DMGDHQ9UI17 866 aaKnown RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 XPO7Q9UIA9 1087 aaKnown RBP9.13□□□□□ -0.95
RIF1-208ENST00000457745 MTUS1Q9ULD2 1270 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 PCDHB5Q9Y5E4 795 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 SLC4A7Q9Y6M7 1214 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 CEP290O15078 2479 aa9.13□□□□□ -0.95
RIF1-208ENST00000457745 NOTCH4Q99466 2003 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 hCG_1818297A0A087WSY0 165 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 CCDC66A2RUB6 948 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 CTAGE15A4D2H0 777 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 SLC38A8A6NNN8 435 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 BHMG1C9JSJ3 638 aaPredicted RBP9.12□□□□□ -0.95
RIF1-208ENST00000457745 FAM72CH0Y354 149 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 PGRMC1O00264 195 aaKnown RBP9.12□□□□□ -0.95
RIF1-208ENST00000457745 CES2O00748 559 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 FSCN2O14926 492 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 RAD51CO43502 376 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 PSTPIP1O43586 416 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 HSF2BPO75031 334 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 ENDOD1O94919 500 aa9.12□□□□□ -0.95
RIF1-208ENST00000457745 ABLIM3O94929 683 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms