RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 MIB1Q86YT6 1006 aa17.05■□□□□ 0.32
CPSF6-203ENST00000456847 SIX6OS1Q8N1H7 587 aa17.05■□□□□ 0.32
CPSF6-203ENST00000456847 ULBP1Q9BZM6 244 aa17.05■□□□□ 0.32
CPSF6-203ENST00000456847 LMBRD1Q9NUN5 540 aa17.05■□□□□ 0.32
CPSF6-203ENST00000456847 K7ESF4 209 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 M0QYV0 167 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 TULP2O00295 520 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 LILRB5O75023 590 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 KRT5P13647 590 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 BRD2P25440 801 aaKnown RBP17.04■□□□□ 0.32
CPSF6-203ENST00000456847 SEC13P55735 322 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 YWHAGP61981 247 aaKnown RBP eCLIP17.04■□□□□ 0.32
CPSF6-203ENST00000456847 KDSRQ06136 332 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 DMWDQ09019 674 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 ADIGQ0VDE8 80 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 GAB4Q2WGN9 574 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 ANO4Q32M45 955 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 DPCR1Q3MIW9 517 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 RAB41Q5JT25 222 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 KLHDC10Q6PID8 442 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 RHBDF2Q6PJF5 856 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 FAM114A1Q8IWE2 563 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 CCDC26Q8TAB7 109 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 ACDQ96AP0 544 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
CPSF6-203ENST00000456847 CLIC5Q9NZA1 410 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 SMG5Q9UPR3 1016 aaKnown RBP17.04■□□□□ 0.32
CPSF6-203ENST00000456847 GOLGA6L22H0YM25 854 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 ZBED1O96006 694 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 APODP05090 189 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 PLA2G4AP47712 749 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 EFEMP1Q12805 493 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 STILQ15468 1287 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 TFAP2BQ92481 460 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 EZH1Q92800 747 aaPredicted RBP17.04■□□□□ 0.32
CPSF6-203ENST00000456847 MED15Q96RN5 788 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 PNKPQ96T60 521 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 CRACR2AQ9BSW2 395 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 UBE2TQ9NPD8 197 aaPredicted RBP17.04■□□□□ 0.32
CPSF6-203ENST00000456847 NCDNQ9UBB6 729 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 RAB23Q9ULC3 237 aa17.04■□□□□ 0.32
CPSF6-203ENST00000456847 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.03■□□□□ 0.32
CPSF6-203ENST00000456847 RNF225M0QZC1 329 aaPredicted RBP17.03■□□□□ 0.32
CPSF6-203ENST00000456847 SLC6A11P48066 632 aa17.03■□□□□ 0.32
CPSF6-203ENST00000456847 LCLAT1Q6UWP7 414 aa17.03■□□□□ 0.32
CPSF6-203ENST00000456847 PRR23BQ6ZRT6 265 aa17.03■□□□□ 0.32
CPSF6-203ENST00000456847 HTR3DQ70Z44 454 aa17.03■□□□□ 0.32
CPSF6-203ENST00000456847 LONP2Q86WA8 852 aa17.03■□□□□ 0.32
CPSF6-203ENST00000456847 C12orf40Q86WS4 652 aa17.03■□□□□ 0.32
CPSF6-203ENST00000456847 KREMEN1Q96MU8 473 aa17.03■□□□□ 0.32
CPSF6-203ENST00000456847 EPC1Q9H2F5 836 aa17.03■□□□□ 0.32
CPSF6-203ENST00000456847 THAP9Q9H5L6 903 aa17.03■□□□□ 0.32
CPSF6-203ENST00000456847 SPHK2Q9NRA0 654 aa17.03■□□□□ 0.32
CPSF6-203ENST00000456847 STRIP2Q9ULQ0 834 aa17.03■□□□□ 0.32
CPSF6-203ENST00000456847 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.03■□□□□ 0.32
CPSF6-203ENST00000456847 CALCAP01258 141 aa17.02■□□□□ 0.32
CPSF6-203ENST00000456847 HMBSP08397 361 aa17.02■□□□□ 0.32
CPSF6-203ENST00000456847 LCP1P13796 627 aa17.02■□□□□ 0.32
CPSF6-203ENST00000456847 EIF2DP41214 584 aaKnown RBP17.02■□□□□ 0.32
CPSF6-203ENST00000456847 RGS7P49802 495 aa17.02■□□□□ 0.32
CPSF6-203ENST00000456847 GBP6Q6ZN66 633 aa17.02■□□□□ 0.32
CPSF6-203ENST00000456847 NAT16Q8N8M0 369 aa17.02■□□□□ 0.32
CPSF6-203ENST00000456847 SUMF1Q8NBK3 374 aa17.02■□□□□ 0.32
CPSF6-203ENST00000456847 SECISBP2LQ93073 1101 aaKnown RBP17.02■□□□□ 0.32
CPSF6-203ENST00000456847 ARHGEF4Q9NR80 690 aa17.02■□□□□ 0.32
CPSF6-203ENST00000456847 HOXC11O43248 304 aaPredicted RBP17.02■□□□□ 0.31
CPSF6-203ENST00000456847 MFAP3P55082 362 aa17.02■□□□□ 0.31
CPSF6-203ENST00000456847 CNGA2Q16280 664 aa17.02■□□□□ 0.31
CPSF6-203ENST00000456847 ZNF276Q8N554 614 aa17.02■□□□□ 0.31
CPSF6-203ENST00000456847 NDRG1Q92597 394 aaKnown RBP17.02■□□□□ 0.31
CPSF6-203ENST00000456847 RUBCNQ92622 972 aa17.02■□□□□ 0.31
CPSF6-203ENST00000456847 HHIPQ96QV1 700 aa17.02■□□□□ 0.31
CPSF6-203ENST00000456847 ZFHX2Q9C0A1 2572 aaPredicted RBP17.01■□□□□ 0.31
CPSF6-203ENST00000456847 STC2O76061 302 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 KAT7O95251 611 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 ERCC5P28715 1186 aaPredicted RBP17.01■□□□□ 0.31
CPSF6-203ENST00000456847 PXNP49023 591 aaPredicted RBP17.01■□□□□ 0.31
CPSF6-203ENST00000456847 ZNF132P52740 706 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 COG7P83436 770 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 DMC1Q14565 340 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 LPAL2Q16609 132 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 MAN2A1Q16706 1144 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 C2orf27AQ580R0 203 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 HSP90AA4PQ58FG1 418 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 TRIM65Q6PJ69 517 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 TPGS1Q6ZTW0 290 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 ENOSF1Q7L5Y1 443 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 TMEM25Q86YD3 366 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 RNF139Q8WU17 664 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 KCTD13Q8WZ19 329 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 FAM81BQ96LP2 452 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 POLR3BQ9NW08 1133 aaPredicted RBP17.01■□□□□ 0.31
CPSF6-203ENST00000456847 MARCH2Q9P0N8 246 aa17.01■□□□□ 0.31
CPSF6-203ENST00000456847 SLC12A8A0AV02 714 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 NEDD8-MDP1E9PL57 170 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 K7EQS6 105 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 PIK3R2O00459 728 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 PRKCSHP14314 528 aaPredicted RBP17■□□□□ 0.31
CPSF6-203ENST00000456847 SLC9A1P19634 815 aa17■□□□□ 0.31
CPSF6-203ENST00000456847 HOXC13P31276 330 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms