RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 ANKRD7Q92527 254 aa13.62□□□□□ -0.23
CASC4P1-201ENST00000456608 CLP1Q92989 425 aaKnown RBP13.62□□□□□ -0.23
CASC4P1-201ENST00000456608 ACSF2Q96CM8 615 aaPredicted RBP13.62□□□□□ -0.23
CASC4P1-201ENST00000456608 RHOXF2Q9BQY4 288 aa13.62□□□□□ -0.23
CASC4P1-201ENST00000456608 ZBED2Q9BTP6 218 aa13.62□□□□□ -0.23
CASC4P1-201ENST00000456608 LRRC1Q9BTT6 524 aa13.62□□□□□ -0.23
CASC4P1-201ENST00000456608 DDX47Q9H0S4 455 aaKnown RBP13.62□□□□□ -0.23
CASC4P1-201ENST00000456608 RRN3Q9NYV6 651 aa13.62□□□□□ -0.23
CASC4P1-201ENST00000456608 NAALADL1Q9UQQ1 740 aa13.62□□□□□ -0.23
CASC4P1-201ENST00000456608 PCDHB12Q9Y5F1 795 aa13.62□□□□□ -0.23
CASC4P1-201ENST00000456608 hCG_1818297A0A087WSY0 165 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 GOLGA6L10A0A0M3HER8 536 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 FAM92AA1XBS5 289 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 TARSL2A2RTX5 802 aaKnown RBP13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 LRRD1A4D1F6 860 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 MDM4O15151 490 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 PHF2O75151 1096 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 ABLIM3O94929 683 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 URODP06132 367 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 RPL17P18621 184 aaKnown RBP13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 CDKN2BP42772 138 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 ATXN1P54253 815 aaKnown RBP13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 SMC1AQ14683 1233 aaKnown RBP13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 ZFYVE27Q5T4F4 411 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 SDHAF4Q5VUM1 108 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 BSPRYQ5W0U4 402 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 CCDC70Q6NSX1 233 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 C8orf74Q6P047 294 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 SCYL2Q6P3W7 929 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 ADAT2Q7Z6V5 191 aaKnown RBP13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 KLHL7Q8IXQ5 586 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 C12orf50Q8NA57 414 aaPredicted RBP13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 FAM71BQ8TC56 605 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 PGAP3Q96FM1 320 aaPredicted RBP13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 SPATA17Q96L03 361 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 RAD9AQ99638 391 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 SNRNP25Q9BV90 132 aaKnown RBP13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 TRIM62Q9BVG3 475 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 PARD6BQ9BYG5 372 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 SLITRK6Q9H5Y7 841 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 COMMD8Q9NX08 183 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 CALCOCO1Q9P1Z2 691 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 HSFX1Q9UBD0 423 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 STK39Q9UEW8 545 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 AFF4Q9UHB7 1163 aaKnown RBP13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 MTUS1Q9ULD2 1270 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 SCML2Q9UQR0 700 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 EFR3BQ9Y2G0 817 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 SLC27A5Q9Y2P5 690 aa13.61□□□□□ -0.23
CASC4P1-201ENST00000456608 C2CD2LO14523 706 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 CAPN9O14815 690 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 LILRB3O75022 631 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 FGF18O76093 207 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 ATP2A2P16615 1042 aaKnown RBP13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 RDXP35241 583 aaKnown RBP13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 YWHAGP61981 247 aaKnown RBP eCLIP13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 RPL10AP62906 217 aaKnown RBP13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 DUSP4Q13115 394 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 RAB33AQ14088 237 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 LLGL1Q15334 1064 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 MGAT5BQ3V5L5 792 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 ODF2Q5BJF6 829 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 TFDP3Q5H9I0 405 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 TPGS2Q68CL5 300 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 SCD5Q86SK9 330 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 VPS52Q8N1B4 723 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 HSPH1Q92598 858 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 CEP295NLQ96MC4 621 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 PNKPQ96T60 521 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 SEPT5Q99719 369 aaPredicted RBP13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 LBHD1Q9BQE6 289 aaPredicted RBP13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 HEMGNQ9BXL5 484 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 ZBP1Q9H171 429 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 MTIF3Q9H2K0 278 aaKnown RBP13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 FBXO44Q9H4M3 255 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 ABCC13Q9NSE7 274 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 RAB21Q9UL25 225 aa13.6□□□□□ -0.23
CASC4P1-201ENST00000456608 MTCL1Q9Y4B5 1905 aaKnown RBP13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 LCHNA4D1U4 455 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 M0QYT0 321 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 RAD51CO43502 376 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 TLL1O43897 1013 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 SOAT2O75908 522 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 RTN3O95197 1032 aaPredicted RBP13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 CD48P09326 243 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 NCAM1P13591 858 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 KRT10P13645 584 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 CHRNA3P32297 505 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 CDH6P55285 790 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 USP46P62068 366 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 KRT17Q04695 432 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 DEUP1Q05D60 604 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 ADCY2Q08462 1091 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 IFRD2Q12894 506 aaPredicted RBP13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 PDK2Q15119 407 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 CA9Q16790 459 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 ZC3H12AQ5D1E8 599 aaKnown RBP13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 ERMARDQ5T6L9 678 aa13.59□□□□□ -0.23
CASC4P1-201ENST00000456608 WDR93Q6P2C0 686 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms