RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 COL4A2P08572 1712 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 TRDMT1O14717 391 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 GNA15P30679 374 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 ZNF132P52740 706 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 MYL5Q02045 173 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 APBA1Q02410 837 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 CSTF1Q05048 431 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 EFEMP1Q12805 493 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 MTAPQ13126 283 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 MIIPQ5JXC2 388 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 KLHDC10Q6PID8 442 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 C11orf57Q6ZUT1 292 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 SLC35F5Q8WV83 523 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 GOLGA1Q92805 767 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 CD101Q93033 1021 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 OTUB2Q96DC9 234 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 KLF16Q9BXK1 252 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 CHRDQ9H2X0 955 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 ST7Q9NRC1 585 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 STRIP2Q9ULQ0 834 aa18.98■□□□□ 0.63
PDLIM2-215ENST00000456545 PIK3R2O00459 728 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 MDM4O15151 490 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 ADH1CP00326 375 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 DRD1P21728 446 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 COG7P83436 770 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 PTK2Q05397 1052 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 TYRO3Q06418 890 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 DHCR24Q15392 516 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 FKBP15Q5T1M5 1219 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 PM20D1Q6GTS8 502 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 PMF1Q6P1K2 205 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 SYNPOQ8N3V7 929 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 ZNF276Q8N554 614 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 ZNF606Q8WXB4 792 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 NDRG1Q92597 394 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 ZFRQ96KR1 1074 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 HSFY1Q96LI6 401 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 CNGB3Q9NQW8 809 aa18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 OLA1Q9NTK5 396 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-215ENST00000456545 HMBSP08397 361 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 PTMSP20962 102 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 CXCL12P48061 93 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 CCR3P51677 355 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 GAD2Q05329 585 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 RAPGEF1Q13905 1077 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 ANO4Q32M45 955 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 PKDCCQ504Y2 493 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 TMEM196Q5HYL7 178 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 HTR3DQ70Z44 454 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 ZNF687Q8N1G0 1237 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 CHFRQ96EP1 664 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 PCMTD1Q96MG8 357 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 ZSWIM1Q9BR11 485 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 LSM14BQ9BX40 385 aaKnown RBP18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 MIS12Q9H081 205 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 MARCH2Q9P0N8 246 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 FBXO4Q9UKT5 387 aa18.96■□□□□ 0.63
PDLIM2-215ENST00000456545 F5P12259 2224 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 SLC12A8A0AV02 714 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 CYP17A1P05093 508 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 SP9P0CG40 484 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 ADH5P11766 374 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 ACADSBP45954 432 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 BPIFB4P59827 614 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 KRT31Q15323 416 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 CDKAL1Q5VV42 579 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 BSPRYQ5W0U4 402 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 RHBDF2Q6PJF5 856 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 ZC3H14Q6PJT7 736 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 BBS7Q8IWZ6 715 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 SPEM1Q8N4L4 309 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 SHC3Q92529 594 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 DCLK3Q9C098 648 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 PDCL3Q9H2J4 239 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 SIX2Q9NPC8 291 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 ABCC13Q9NSE7 274 aa18.95■□□□□ 0.62
PDLIM2-215ENST00000456545 FOXN3O00409 490 aaPredicted RBP18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 ATG13O75143 517 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 FBXO21O94952 628 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 EGFP01133 1207 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 KRT9P35527 623 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 DAOAP59103 153 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 KCNMA1Q12791 1236 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 CCINQ13939 588 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 FBXO43Q4G163 708 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 ANO6Q4KMQ2 910 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 LY6G5CQ5SRR4 150 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 KLHDC7AQ5VTJ3 777 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 FSTL4Q6MZW2 842 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 DENND1BQ6P3S1 775 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 CCDC26Q8TAB7 109 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 IRGQQ8WZA9 623 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 EDEM1Q92611 657 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 WBP2Q969T9 261 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 FBRSL1Q9HCM7 1045 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 ACP6Q9NPH0 428 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 ZNF510Q9Y2H8 683 aa18.94■□□□□ 0.62
PDLIM2-215ENST00000456545 YJEFN3A6XGL0 299 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 SMTNL1A8MU46 457 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 BECN2A8MW95 431 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms