RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 HTR3DQ70Z44 454 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 EXOC4Q96A65 974 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 ARID3AQ99856 593 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 LSM14BQ9BX40 385 aaKnown RBP16.95■□□□□ 0.3
GPC1-206ENST00000455111 CD93Q9NPY3 652 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 TBC1D14Q9P2M4 693 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 SCML2Q9UQR0 700 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 ATP8B3O60423 1300 aa16.95■□□□□ 0.3
GPC1-206ENST00000455111 A0A1W2PQF6 199 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 PRRT4C9JH25 899 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 CALUO43852 315 aaPredicted RBP16.94■□□□□ 0.3
GPC1-206ENST00000455111 FOXD2O60548 495 aaPredicted RBP16.94■□□□□ 0.3
GPC1-206ENST00000455111 CAVIN2O95810 425 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 ADH1CP00326 375 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 KLKB1P03952 638 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 MYL1P05976 194 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 CD58P19256 250 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 GBP1P32455 592 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 PTGER3P43115 390 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 TNFRSF4P43489 277 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 PPP1R26Q5T8A7 1209 aaPredicted RBP16.94■□□□□ 0.3
GPC1-206ENST00000455111 EGFLAMQ63HQ2 1017 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 Q6ZNB5 142 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 GUF1Q8N442 669 aaKnown RBP16.94■□□□□ 0.3
GPC1-206ENST00000455111 TERB1Q8NA31 727 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 OTUB2Q96DC9 234 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 CYFIP2Q96F07 1278 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 EDEM2Q9BV94 578 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 MMRN2Q9H8L6 949 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.94■□□□□ 0.3
GPC1-206ENST00000455111 SH3BP1Q9Y3L3 701 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 USP3Q9Y6I4 520 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 FRYQ5TBA9 3013 aa16.94■□□□□ 0.3
GPC1-206ENST00000455111 MUC22E2RYF6 1773 aaPredicted RBP16.93■□□□□ 0.3
GPC1-206ENST00000455111 A0A1W2PQ27 194 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 A0A1W2PQ64 194 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 A0A1W2PQD8 194 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 C4orf47A7E2U8 309 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 RHOBTB1O94844 696 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 KCNK5O95279 499 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 CISD3P0C7P0 127 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 FAM200BP0CF97 657 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 GABRG2P18507 467 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 ACO1P21399 889 aaKnown RBP16.93■□□□□ 0.3
GPC1-206ENST00000455111 WASP42768 502 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 KIF11P52732 1056 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 KRT85P78386 507 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 ELF2Q15723 593 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 USP39Q53GS9 565 aaKnown RBP16.93■□□□□ 0.3
GPC1-206ENST00000455111 KIAA1211LQ6NV74 962 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 BHLHA9Q7RTU4 235 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 TTC30AQ86WT1 665 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 FAM186BQ8IYM0 893 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 ERLEC1Q96DZ1 483 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 MARK1Q9P0L2 795 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 FRMD4BQ9Y2L6 1034 aa16.93■□□□□ 0.3
GPC1-206ENST00000455111 WDFY3Q8IZQ1 3526 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 TCRBV21S2A2A0A5A6 115 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 CLSTN1O94985 981 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 ZNF202O95125 648 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 RARGP13631 454 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 PMS1P54277 932 aaKnown RBP16.92■□□□□ 0.3
GPC1-206ENST00000455111 IRX4P78413 519 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 ANO4Q32M45 955 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 ZNF394Q53GI3 561 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 C10orf76Q5T2E6 689 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 RNF43Q68DV7 783 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 IL31Q6EBC2 164 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 ARMCX6Q7L4S7 300 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 TMEFF1Q8IYR6 380 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 SLC4A11Q8NBS3 891 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 HMGB4Q8WW32 186 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 TATDN2Q93075 761 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 NT5C1AQ9BXI3 368 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 NIF3L1Q9GZT8 377 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 FBXO44Q9H4M3 255 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 CYP3A43Q9HB55 503 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 TMEM8AQ9HCN3 771 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 FSCN3Q9NQT6 498 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 TLR8Q9NR97 1041 aaKnown RBP16.92■□□□□ 0.3
GPC1-206ENST00000455111 WASF3Q9UPY6 502 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 STARD13Q9Y3M8 1113 aa16.92■□□□□ 0.3
GPC1-206ENST00000455111 ATXN2Q99700 1313 aaKnown RBP16.92■□□□□ 0.3
GPC1-206ENST00000455111 MAP1BP46821 2468 aaKnown RBP16.91■□□□□ 0.3
GPC1-206ENST00000455111 TULP2O00295 520 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 CACNG3O60359 315 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 STC2O76061 302 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 P4HA1P13674 534 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 KCNA4P22459 653 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 RAD23BP54727 409 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 ENPEPQ07075 957 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 ADAM9Q13443 819 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 PNOCQ13519 176 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 HSF5Q4G112 596 aaPredicted RBP16.91■□□□□ 0.3
GPC1-206ENST00000455111 CBWD6Q4V339 395 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 CBWD3Q5JTY5 395 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 CBWD5Q5RIA9 395 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 TPGS1Q6ZTW0 290 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 INTS8Q75QN2 995 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms