RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 EDEM1Q92611 657 aa11.51□□□□□ -0.57
SCN9A-205ENST00000454569 SPATA17Q96L03 361 aa11.51□□□□□ -0.57
SCN9A-205ENST00000454569 ZNF334Q9HCZ1 680 aaPredicted RBP11.51□□□□□ -0.57
SCN9A-205ENST00000454569 CNGB3Q9NQW8 809 aa11.51□□□□□ -0.57
SCN9A-205ENST00000454569 GMIPQ9P107 970 aa11.51□□□□□ -0.57
SCN9A-205ENST00000454569 STK39Q9UEW8 545 aa11.51□□□□□ -0.57
SCN9A-205ENST00000454569 DNAI1Q9UI46 699 aa11.51□□□□□ -0.57
SCN9A-205ENST00000454569 MAGED2Q9UNF1 606 aaPredicted RBP11.51□□□□□ -0.57
SCN9A-205ENST00000454569 SSX2IPQ9Y2D8 614 aa11.51□□□□□ -0.57
SCN9A-205ENST00000454569 ALG6Q9Y672 507 aa11.51□□□□□ -0.57
SCN9A-205ENST00000454569 A0A1W2PQH9 124 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 FAM92AA1XBS5 289 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 ATP1A1P05023 1023 aaKnown RBP11.5□□□□□ -0.57
SCN9A-205ENST00000454569 ADH1AP07327 375 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 TNNT1P13805 278 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 COMTP21964 271 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 MARCKSL1P49006 195 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 TUFMP49411 452 aaKnown RBP11.5□□□□□ -0.57
SCN9A-205ENST00000454569 TAS2R40P59535 323 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 ETF1P62495 437 aaKnown RBP11.5□□□□□ -0.57
SCN9A-205ENST00000454569 TAF10Q12962 218 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 ZNF697Q5TEC3 545 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 TXNRD3NBQ6F5E7 133 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 DAAM2Q86T65 1068 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 NT5DC3Q86UY8 548 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 MSANTD4Q8NCY6 345 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 FAM149B1Q96BN6 582 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 EMILIN2Q9BXX0 1053 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 MAGEB5Q9BZ81 275 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 ZNF576Q9H609 170 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 MRPL47Q9HD33 250 aaKnown RBP11.5□□□□□ -0.57
SCN9A-205ENST00000454569 LHX6Q9UPM6 363 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 SCINQ9Y6U3 715 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 XIRP2A4UGR9 3374 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 SPTBN5Q9NRC6 3674 aaKnown RBP11.5□□□□□ -0.57
SCN9A-205ENST00000454569 PRUNE2Q8WUY3 3088 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 KIF5CO60282 957 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 TADA3O75528 432 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 PROSCO94903 275 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 GLUD1P00367 558 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 LTFP02788 710 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 C8AP07357 584 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 PDGFRAP16234 1089 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 ELF1P32519 619 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 NRIP1P48552 1158 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 RPL10AP62906 217 aaKnown RBP11.5□□□□□ -0.57
SCN9A-205ENST00000454569 YWHAZP63104 245 aaKnown RBP11.5□□□□□ -0.57
SCN9A-205ENST00000454569 ATP11AP98196 1134 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 CREMQ03060 361 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 GRIN2CQ14957 1233 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 LRIT3Q3SXY7 679 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 ATP13A4Q4VNC1 1196 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 MEI1Q5TIA1 1274 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 BSPRYQ5W0U4 402 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 DNAJB7Q7Z6W7 309 aaPredicted RBP11.5□□□□□ -0.57
SCN9A-205ENST00000454569 TMEM150AQ86TG1 271 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 ZDHHC17Q8IUH5 632 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 SCML4Q8N228 414 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 ADAM32Q8TC27 787 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 KRT35Q92764 455 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 CD101Q93033 1021 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 LRCH3Q96II8 777 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 SLC2A13Q96QE2 648 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 TBCBQ99426 244 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 DDX23Q9BUQ8 820 aaKnown RBP11.5□□□□□ -0.57
SCN9A-205ENST00000454569 TTLL2Q9BWV7 592 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 TLR10Q9BXR5 811 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 LRRC3Q9BY71 257 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 PRDM12Q9H4Q4 367 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 HCFC1R1Q9NWW0 138 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 HSFX1Q9UBD0 423 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 SCML2Q9UQR0 700 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 USTQ9Y2C2 406 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 HCFC2Q9Y5Z7 792 aa11.5□□□□□ -0.57
SCN9A-205ENST00000454569 KIF2AO00139 706 aaPredicted RBP11.49□□□□□ -0.57
SCN9A-205ENST00000454569 MYO1FO00160 1098 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 MDM4O15151 490 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 CCL16O15467 120 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 DDX3YO15523 660 aaKnown RBP11.49□□□□□ -0.57
SCN9A-205ENST00000454569 LINC01565O15544 149 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 FBXO21O94952 628 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 TBX18O95935 607 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 COL9A1P20849 921 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 GPD1P21695 349 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 PSMA2P25787 234 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 YWHAQP27348 245 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 IL1R2P27930 398 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 SCNN1AP37088 669 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 DNA2P51530 1060 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 ZNF143P52747 638 aaPredicted RBP11.49□□□□□ -0.57
SCN9A-205ENST00000454569 YWHAGP61981 247 aaKnown RBP eCLIP11.49□□□□□ -0.57
SCN9A-205ENST00000454569 PLD1Q13393 1074 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 KCNC3Q14003 757 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 ADGRE1Q14246 886 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 CDO1Q16878 200 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 DCAF6Q58WW2 860 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 EFHC1Q5JVL4 640 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 CYP4V2Q6ZWL3 525 aaPredicted RBP11.49□□□□□ -0.57
SCN9A-205ENST00000454569 TXLNBQ8N3L3 684 aa11.49□□□□□ -0.57
SCN9A-205ENST00000454569 C12orf76Q8N812 135 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms