RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CD59P13987 128 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 YWHAQP27348 245 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ABCD1P33897 745 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PDE6CP51160 858 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CLDN6P56747 220 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MAP3K7CLP57077 242 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GFPT1Q06210 699 aaPredicted RBP6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZNF33AQ06730 810 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 LMAN2Q12907 356 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GRIK2Q13002 908 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ALCAMQ13740 583 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 E2F4Q16254 413 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 DUOXA2Q1HG44 320 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 COL28A1Q2UY09 1125 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PLEKHG6Q3KR16 790 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FAM26FQ5R3K3 315 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GRAMD4Q6IC98 578 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CCDC73Q6ZRK6 1079 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PAQR9Q6ZVX9 377 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 C11orf74Q86VG3 221 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NAXDQ8IW45 347 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CCDC65Q8IXS2 484 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FUKQ8N0W3 1084 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 HDDC3Q8N4P3 179 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZNF366Q8N895 744 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 C12orf29Q8N999 325 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZMIZ2Q8NF64 920 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SLC2A14Q8TDB8 520 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SCFD1Q8WVM8 642 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SORCS1Q8WY21 1168 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TWNKQ96RR1 684 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SMOQ99835 787 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 BBS2Q9BXC9 721 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MIR1-1HGQ9H1L0 117 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 DMAP1Q9NPF5 467 aaPredicted RBP6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SPHK2Q9NRA0 654 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 DEC1Q9P2X7 70 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FNDC3AQ9Y2H6 1198 aaKnown RBP6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 RAXQ9Y2V3 346 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NEUROG3Q9Y4Z2 214 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PCDHB13Q9Y5F0 798 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SRPRBQ9Y5M8 271 aaKnown RBP6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CFAP46Q8IYW2 2715 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CKAP5Q14008 2032 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PTPRQQ9UMZ3 2332 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 A0A1W2PQH9 124 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FAM149AA5PLN7 773 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TMEM8BA6NDV4 472 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 LRRIQ3A6PVS8 624 aaPredicted RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SOBPA7XYQ1 873 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 AP5Z1O43299 807 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 OPHN1O60890 802 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PHACTR2O75167 634 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TACC1O75410 805 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 VNN1O95497 513 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 LDHAP00338 332 aaKnown RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 HMBSP08397 361 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SERPINF2P08697 491 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TYRP14679 529 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SYT1P21579 422 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 EIF2DP41214 584 aaKnown RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 DLG4P78352 724 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 IL9RQ01113 521 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 POU5F1Q01860 360 aaKnown RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GAD2Q05329 585 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SCAPQ12770 1279 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TRPC3Q13507 836 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PSMD6Q15008 389 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MAPRE1Q15691 268 aaKnown RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FUT11Q495W5 492 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 HECTD3Q5T447 861 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PEAR1Q5VY43 1037 aaPredicted RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 BTBD8Q5XKL5 378 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SLC23A3Q6PIS1 610 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 EPM2AIP1Q7L775 607 aaPredicted RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FAM124AQ86V42 546 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 DDX42Q86XP3 938 aaKnown RBP eCLIP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 RGL4Q8IZJ4 473 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NUP93Q8N1F7 819 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 IPO4Q8TEX9 1081 aaKnown RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SNX19Q92543 992 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SMARCD1Q96GM5 515 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MRGPRX1Q96LB2 322 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 BBC3Q96PG8 261 aaPredicted RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MKRN2Q9H000 416 aaKnown RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SLC32A1Q9H598 525 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NMUR1Q9HB89 426 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SLC39A2Q9NP94 309 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MTMR6Q9Y217 621 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MSRB2Q9Y3D2 182 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 URB1O60287 2271 aaKnown RBP6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZNF462Q96JM2 2506 aa6.34□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ATP8B3O60423 1300 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 E2F8A0AVK6 867 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KCNJ18B7U540 433 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ARHGAP33O14559 1287 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 EIF3DO15371 548 aaKnown RBP eCLIP6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CACNG3O60359 315 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms