RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 BEST2Q8NFU1 509 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 BCAS4Q8TDM0 211 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 GUCD1Q96NT3 240 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 ZWILCHQ9H900 591 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 UBN1Q9NPG3 1134 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 MTMR10Q9NXD2 777 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 ITGAVP06756 1048 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 KDELR1P24390 212 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 CTNNB1P35222 781 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 BMPR1AP36894 532 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 SMTNL2Q2TAL5 461 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 C6orf118Q5T5N4 469 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 FAM102AQ5T9C2 384 aaPredicted RBP11.2□□□□□ -0.62
PKP4-206ENST00000452162 TRNP1Q6NT89 227 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 FAM183BPQ6ZVS7 135 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 DPH6Q7L8W6 267 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 ZNF280BQ86YH2 543 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 C12orf29Q8N999 325 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 UHMK1Q8TAS1 419 aaKnown RBP11.2□□□□□ -0.62
PKP4-206ENST00000452162 SLC35B2Q8TB61 432 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 CCHCR1Q8TD31 782 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 EPS8L3Q8TE67 593 aaKnown RBP11.2□□□□□ -0.62
PKP4-206ENST00000452162 EPN3Q9H201 632 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 ADAM7Q9H2U9 754 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 ZNF148Q9UQR1 794 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 SNX9Q9Y5X1 595 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 ATG2AQ2TAZ0 1938 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 E5RJQ4 531 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 INPPL1O15357 1258 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 DDHD2O94830 711 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 MIPP30301 263 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 ZNF143P52747 638 aaPredicted RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 P3H1Q32P28 736 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 XKR4Q5GH76 650 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 GLRA4Q5JXX5 417 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 C9orf57Q5W0N0 161 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 BBS12Q6ZW61 710 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 GSTA5Q7RTV2 222 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 RELL1Q8IUW5 271 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 FBXO22Q8NEZ5 403 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 CMASQ8NFW8 434 aaPredicted RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 URGCPQ8TCY9 931 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 GDPD5Q8WTR4 605 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 PWWP2AQ96N64 755 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 MRPL9Q9BYD2 267 aaKnown RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 ROPN1BQ9BZX4 212 aaPredicted RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 RABEP2Q9H5N1 569 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 NRDE2Q9H7Z3 1164 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 ROPN1Q9HAT0 212 aaPredicted RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 DNAJB4Q9UDY4 337 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 C2CD4BA6NLJ0 364 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 NT5C1B-RDH14C9J2C7 533 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 DNALI1O14645 258 aaPredicted RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 PTGESO14684 152 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 LPXNO60711 386 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 TTC4O95801 387 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 TRUB2O95900 331 aaKnown RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 AGTP01019 485 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 GPD1P21695 349 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 PCK1P35558 622 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 RNASELQ05823 741 aaKnown RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 AUHQ13825 339 aaKnown RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 SKIDA1Q1XH10 827 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 KCNT1Q5JUK3 1230 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 PPP1R26Q5T8A7 1209 aaPredicted RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 CYP4V2Q6ZWL3 525 aaPredicted RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 ACOT1Q86TX2 421 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 TTC30AQ86WT1 665 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 ZCCHC9Q8N567 271 aaKnown RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 COLGALT1Q8NBJ5 622 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 MYLIPQ8WY64 445 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 HAUS1Q96CS2 278 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 PIWIL1Q96J94 861 aaKnown RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 PEBP4Q96S96 227 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 CDX2Q99626 313 aaPredicted RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 CNPY3Q9BT09 278 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 FRMD8P1Q9BZ68 369 aaPredicted RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 FOXP3Q9BZS1 431 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 MIS12Q9H081 205 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 CNOT10Q9H9A5 744 aaKnown RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 DNAJC17Q9NVM6 304 aaKnown RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 ASNSD1Q9NWL6 643 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 NINJ2Q9NZG7 142 aa11.19□□□□□ -0.62
PKP4-206ENST00000452162 UBQLN1Q9UMX0 589 aaKnown RBP11.19□□□□□ -0.62
PKP4-206ENST00000452162 TLDC2A0PJX2 215 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 SMIM23A6NLE4 172 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 TULP2O00295 520 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 PIRO00625 290 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 RASGRF2O14827 1237 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 RGS16O15492 202 aaPredicted RBP11.18□□□□□ -0.62
PKP4-206ENST00000452162 ACSL3O95573 720 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 CD48P09326 243 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 ZSCAN5DPP0CG00 497 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 SETSIPP0DME0 302 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 ETS1P14921 441 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 KCNE1P15382 129 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 CCT5P48643 541 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 IFI35P80217 286 aaPredicted RBP11.18□□□□□ -0.62
PKP4-206ENST00000452162 ADGRE1Q14246 886 aa11.18□□□□□ -0.62
PKP4-206ENST00000452162 TAF5Q15542 800 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms