RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 ASTLQ6HA08 431 aaPredicted RBP13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 ZNF852Q6ZMS4 543 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 BEND5Q7L4P6 421 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 SLC47A2Q86VL8 602 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 RALGPS2Q86X27 583 aaPredicted RBP13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 ATP2A3Q93084 1043 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 IQCDQ96DY2 449 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 EDEM3Q9BZQ6 932 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 PDCL3Q9H2J4 239 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 NMUR1Q9HB89 426 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 ST7Q9NRC1 585 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 OSER1Q9NX31 292 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 DUS2Q9NX74 493 aaKnown RBP13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 AJAP1Q9UKB5 411 aaPredicted RBP13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 STRIP2Q9ULQ0 834 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 CA14Q9ULX7 337 aa13.71□□□□□ -0.21
SNRNP27-203ENST00000450162 ANAPC1Q9H1A4 1944 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 OBSL1O75147 1896 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 PATJQ8NI35 1801 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 KANSL1LA0AUZ9 987 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 FAM86C2PA6NEL3 165 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 NCAM2O15394 837 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 LSM8O95777 96 aaKnown RBP13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 TPM3P06753 285 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 LCP1P13796 627 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 RGS7P49802 495 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 KLK7P49862 253 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 KPNA1P52294 538 aaPredicted RBP13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 UBASH3AP57075 661 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 FANCCQ00597 558 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 RUNX3Q13761 415 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 BSPRYQ5W0U4 402 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 DENND1BQ6P3S1 775 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 RSRC2Q7L4I2 434 aaKnown RBP13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 CACNA2D4Q7Z3S7 1137 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 CPA6Q8N4T0 437 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 TMEM35BQ8NCS4 154 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 RNF139Q8WU17 664 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 PRRX2Q99811 253 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 NUP58Q9BVL2 599 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 KLF16Q9BXK1 252 aaPredicted RBP13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 MIS12Q9H081 205 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 ACP6Q9NPH0 428 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 NLRC4Q9NPP4 1024 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 HEBP1Q9NRV9 189 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 CFAP97Q9P2B7 532 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 SH3BP1Q9Y3L3 701 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 PIAS3Q9Y6X2 628 aa13.7□□□□□ -0.22
SNRNP27-203ENST00000450162 STK25O00506 426 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 TEX33O43247 280 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 NFATC1O95644 943 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 CALCAP01258 141 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 AOC1P19801 751 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 CDH5P33151 784 aaPredicted RBP13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 MAGEA9P43362 315 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 PGFP49763 221 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 ZNF445P59923 1031 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 ZXDBP98169 803 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 PDCLQ13371 301 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 FIGNQ5HY92 759 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 TPRG1Q6ZUI0 275 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 HTR3DQ70Z44 454 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 ZDHHC17Q8IUH5 632 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 PPP1R13BQ96KQ4 1090 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 ZFRQ96KR1 1074 aaKnown RBP13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 NAP1L5Q96NT1 182 aaPredicted RBP13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 DCLK3Q9C098 648 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 KCNH6Q9H252 994 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 TBC1D17Q9HA65 648 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 SMPD4Q9NXE4 827 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 LSM7Q9UK45 103 aaKnown RBP13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 ZNF510Q9Y2H8 683 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 SIT1Q9Y3P8 196 aa13.69□□□□□ -0.22
SNRNP27-203ENST00000450162 YJEFN3A6XGL0 299 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 E7ENQ6 273 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 EPHB6O15197 1021 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 GABBR2O75899 941 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 GFPT2O94808 682 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 TBX18O95935 607 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 LTFP02788 710 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 GLI1P08151 1106 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 PNMA6AP0CW24 399 aaPredicted RBP13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 FERP16591 822 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 AVPR2P30518 371 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 EML3Q32P44 896 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 EFHC1Q5JVL4 640 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 TRIM72Q6ZMU5 477 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 BHLHA9Q7RTU4 235 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 SCUBE3Q8IX30 993 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 ADGRG2Q8IZP9 1017 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 WDTC1Q8N5D0 677 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 MSANTD4Q8NCY6 345 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 FLCNQ8NFG4 579 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 EPS8L1Q8TE68 723 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 IPO4Q8TEX9 1081 aaKnown RBP13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 DDX1Q92499 740 aaKnown RBP13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 FAM3CQ92520 227 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 ZFYVE19Q96K21 471 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 EBF3Q9H4W6 596 aa13.68□□□□□ -0.22
SNRNP27-203ENST00000450162 ECT2Q9H8V3 914 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms