RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 NET1Q7Z628 596 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 NLRP10Q86W26 655 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 CLEC10AQ8IUN9 316 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 Q8N1Y9 231 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 SH2D3CQ8N5H7 860 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 TMEM52Q8NDY8 209 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 APPL2Q8NEU8 664 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 FLAD1Q8NFF5 587 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 SHKBP1Q8TBC3 707 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 SLC35G2Q8TBE7 412 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 KCNG4Q8TDN1 519 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PIGOQ8TEQ8 1089 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PYROXD1Q8WU10 500 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZFPM2Q8WW38 1151 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 ATXN2LQ8WWM7 1075 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 ATRIPQ8WXE1 791 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 USP6NLQ92738 828 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 E2F7Q96AV8 911 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 EME1Q96AY2 570 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 DGCR14Q96DF8 476 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 ERP27Q96DN0 273 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 CHMP6Q96FZ7 201 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 TEKT5Q96M29 485 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 LRGUKQ96M69 825 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 FAM20AQ96MK3 541 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 SAMD11Q96NU1 681 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 BIRC8Q96P09 236 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 RPRD1AQ96P16 312 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 XPO6Q96QU8 1125 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 STRBPQ96SI9 672 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 MMS19Q96T76 1030 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 ELF4Q99607 663 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 KCNJ15Q99712 375 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 CIB1Q99828 191 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PSD2Q9BQI7 771 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 FAM83CQ9BQN1 747 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 DBNDD2Q9BQY9 259 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 HERC2P3Q9BVR0 1158 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 LSG1Q9H089 658 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 VPS16Q9H269 839 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 SLC12A5Q9H2X9 1139 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 MS4A5Q9H3V2 200 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 C19orf44Q9H6X5 657 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 DCLRE1BQ9H816 532 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 MAN1C1Q9NR34 630 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PAG1Q9NWQ8 432 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 CLDND1Q9NY35 253 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 DNAJB4Q9UDY4 337 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 SEC63Q9UGP8 760 aaKnown RBP3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 INTUQ9ULD6 942 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 TRAF3IP3Q9Y228 551 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 INVSQ9Y283 1065 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PTPN22Q9Y2R2 807 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 IFT52Q9Y366 437 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 TELO2Q9Y4R8 837 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 PCDHB6Q9Y5E3 794 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 SETBP1Q9Y6X0 1596 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 CACNA1FO60840 1977 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 NEXMIFQ5QGS0 1516 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 DLG5Q8TDM6 1919 aa3.8□□□□□ -1.8
HMGB3P8-201ENST00000449709 C1orf167Q5SNV9 1468 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 ARHGEF10O15013 1369 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 CPDO75976 1380 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZMYM6O95789 1325 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 ACEP12821 1306 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 UMODL1Q5DID0 1318 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 USP42Q9H9J4 1324 aaKnown RBP3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 SSU72P8A0A1W2PR75 194 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 VPS37CA5D8V6 355 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 TRIM64BA6NI03 449 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 NOTOA8MTQ0 251 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 A8MUI8 341 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 FAM155AB1AL88 458 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 H0YC42 278 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 TRIM77I1YAP6 450 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 BET1O15155 118 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 CETN3O15182 167 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 PAX4O43316 350 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 SCO2O43819 266 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 NPHS1O60500 1241 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZC3H11AO75152 810 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 JRKO75564 520 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 ATP5HO75947 161 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 PDE5AO76074 875 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 UNC5CO95185 931 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 TFRCP02786 760 aaKnown RBP3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 ATP1A3P13637 1013 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 KRT15P19012 456 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 GNAT2P19087 354 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 POLR2CP19387 275 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 HOXC13P31276 330 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 POLD2P49005 469 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 CEBPAP49715 358 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 BCAP31P51572 246 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 TPD52P55327 224 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 UBASH3AP57075 661 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZNF280AP59817 542 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 IRF9Q00978 393 aa3.79□□□□□ -1.8
HMGB3P8-201ENST00000449709 GUCY2DQ02846 1103 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms