RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 CAVIN1Q6NZI2 390 aaKnown RBP12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 Q6ZS52 159 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 ENOSF1Q7L5Y1 443 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 MIB1Q86YT6 1006 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 SIX6OS1Q8N1H7 587 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 ENOX1Q8TC92 643 aaKnown RBP12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 NDRG1Q92597 394 aaKnown RBP12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 WBP2Q969T9 261 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 SIX2Q9NPC8 291 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 RASAL2Q9UJF2 1139 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 CNTN6Q9UQ52 1028 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 FANCMQ8IYD8 2048 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 BECN2A8MW95 431 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 PIK3R2O00459 728 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 ZBED1O96006 694 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 LCP1P13796 627 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 GNA15P30679 374 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 YWHAGP61981 247 aaKnown RBP eCLIP12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 GOLGA8FQ08AF8 430 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 GOLGA8DPQ0D2H9 430 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 GRSF1Q12849 480 aaKnown RBP eCLIP12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 NR1H3Q13133 447 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 CNGA2Q16280 664 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 TMEM196Q5HYL7 178 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 DGKKQ5KSL6 1271 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 CDKAL1Q5VV42 579 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 RSRC2Q7L4I2 434 aaKnown RBP12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 BBS7Q8IWZ6 715 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 ARHGAP18Q8N392 663 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 KIAA1958Q8N8K9 716 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 SHC3Q92529 594 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 FAM81BQ96LP2 452 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 P2RY13Q9BPV8 354 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 KLF16Q9BXK1 252 aaPredicted RBP12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 ACP6Q9NPH0 428 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 CLIC5Q9NZA1 410 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 DNMT3LQ9UJW3 386 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 LSM7Q9UK45 103 aaKnown RBP12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 FAM186AA6NE01 2351 aa12.53□□□□□ -0.4
LSP1P3-201ENST00000449530 THAP12O43422 761 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 LETM1O95202 739 aaPredicted RBP12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 ADH1CP00326 375 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 EGFP01133 1207 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 HMBSP08397 361 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 SP9P0CG40 484 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 PNMA6AP0CW24 399 aaPredicted RBP12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 MYL5Q02045 173 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 TYRO3Q06418 890 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 EFEMP1Q12805 493 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 CCINQ13939 588 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 KRT31Q15323 416 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 PMF1Q6P1K2 205 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 DENND1BQ6P3S1 775 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 KLHDC10Q6PID8 442 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 TSSK4Q6SA08 328 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 BHLHA9Q7RTU4 235 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 MAML2Q8IZL2 1156 aaPredicted RBP12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 KCTD13Q8WZ19 329 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 CD101Q93033 1021 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 IER2Q9BTL4 223 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 LSM14BQ9BX40 385 aaKnown RBP12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 PRMT8Q9NR22 394 aaPredicted RBP12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 FANCLQ9NW38 375 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 TBC1D14Q9P2M4 693 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 DNAJC12Q9UKB3 198 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 ATG2BQ96BY7 2078 aa12.52□□□□□ -0.41
LSP1P3-201ENST00000449530 YJEFN3A6XGL0 299 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 E7ENQ6 273 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 TRDMT1O14717 391 aaKnown RBP12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 MED7O43513 233 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 TPM2P07951 284 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 ADH5P11766 374 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 OPRD1P41143 372 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 NBL1P41271 181 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 GALK1P51570 392 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 DAOAP59103 153 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 SATB1Q01826 763 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 CSTF1Q05048 431 aaKnown RBP12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 KDSRQ06136 332 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 RAPGEF1Q13905 1077 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 GAS6Q14393 721 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 DHCR24Q15392 516 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 GAB4Q2WGN9 574 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 LY6G5CQ5SRR4 150 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 BTBD8Q5XKL5 378 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 PM20D1Q6GTS8 502 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 AOPEPQ8N6M6 819 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 CLEC4CQ8WTT0 213 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 SLC35F5Q8WV83 523 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 EDEM1Q92611 657 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 EXOC4Q96A65 974 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 VPS16Q9H269 839 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 FBRSL1Q9HCM7 1045 aaKnown RBP12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 CNGB3Q9NQW8 809 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 ST7Q9NRC1 585 aa12.51□□□□□ -0.41
LSP1P3-201ENST00000449530 MARCH2Q9P0N8 246 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms