RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 YIPF2Q9BWQ6 316 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 SLC46A2Q9BY10 475 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 CXCL16Q9H2A7 254 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 ACSS3Q9H6R3 686 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 ZFYVE1Q9HBF4 777 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 NPHS2Q9NP85 383 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 HELLSQ9NRZ9 838 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 TBC1D22BQ9NU19 505 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 BCCIPQ9P287 314 aaKnown RBP eCLIP3.58□□□□□ -1.84
PMS1-215ENST00000447232 FBXL5Q9UKA1 691 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 CCL26Q9Y258 94 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 RNF114Q9Y508 228 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 COL4A3BPQ9Y5P4 624 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 MED13LQ71F56 2210 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 MYO18AQ92614 2054 aaKnown RBP3.58□□□□□ -1.84
PMS1-215ENST00000447232 TMEM150BA6NC51 233 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 PAPSS1O43252 624 aaPredicted RBP3.58□□□□□ -1.84
PMS1-215ENST00000447232 CPNE3O75131 537 aaKnown RBP3.58□□□□□ -1.84
PMS1-215ENST00000447232 RFPL3O75679 317 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 FGF19O95750 216 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 GABRG2P18507 467 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 OPRD1P41143 372 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 AFMP43652 599 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 ERVPABLB-1P60509 514 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 GAB4Q2WGN9 574 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 ARL13BQ3SXY8 428 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 MTERF2Q49AM1 385 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 WDR45BQ5MNZ6 344 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 FAM9BQ8IZU0 186 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 CMTM8Q8IZV2 173 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 CPA6Q8N4T0 437 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 DCBLD1Q8N8Z6 715 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 C3orf58Q8NDZ4 430 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 ENGASEQ8NFI3 743 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 SPATA20Q8TB22 786 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 CRYGNQ8WXF5 182 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 USP13Q92995 863 aaPredicted RBP3.58□□□□□ -1.84
PMS1-215ENST00000447232 CPB2Q96IY4 423 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 UBAC1Q9BSL1 405 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.58□□□□□ -1.84
PMS1-215ENST00000447232 ATXN3LQ9H3M9 355 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 C1GALT1Q9NS00 363 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 RAD18Q9NS91 495 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 CALCOCO1Q9P1Z2 691 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 WNT6Q9Y6F9 365 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 AKAP9Q99996 3911 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 TCRBV21S2A2A0A5A6 115 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 I3L4J1 428 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 TRAPPC3O43617 180 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 NDUFB5O43674 189 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 B3GAT3O94766 335 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ERLIN2O94905 339 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 KLF8O95600 359 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 THP07101 528 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 SFTPCP11686 197 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 GABRR2P28476 465 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 DCTP40126 519 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 KIR2DL1P43626 348 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 ACADVLP49748 655 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ARPP19P56211 112 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 PTH1RQ03431 593 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 MAP7Q14244 749 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 UPP1Q16831 310 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ARHGAP15Q53QZ3 475 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 EOGTQ5NDL2 527 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 SYCP2LQ5T4T6 812 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 B4GALNT3Q6L9W6 998 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 CBLL1Q75N03 491 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ZNF765Q7L2R6 523 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ZNF589Q86UQ0 364 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 PLA2G4DQ86XP0 818 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 TEX2Q8IWB9 1127 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ZCCHC9Q8N567 271 aaKnown RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 PSMG2Q969U7 264 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 RRP36Q96EU6 259 aaKnown RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 PGBD1Q96JS3 809 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 CITED4Q96RK1 184 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 SH2D3AQ9BRG2 576 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 KIF9Q9HAQ2 790 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 CD248Q9HCU0 757 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ABCB6Q9NP58 842 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 DISC1Q9NRI5 854 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 FTSJ1Q9UET6 329 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ZMYM5Q9UJ78 669 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 TTC41PQ6P2S7 1318 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 APCP25054 2843 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 OBSL1O75147 1896 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ZNF638Q14966 1978 aaKnown RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 A0A0D9SFI3 127 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ENC1O14682 589 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 SYN3O14994 580 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ZNF217O75362 1048 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 SRGAP2CP0DJJ0 459 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ARF4P18085 180 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 RAB6AP20340 208 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ASPAP45381 313 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 BRCC3P46736 316 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 CLCNKBP51801 687 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms