RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 RXFP2Q8WXD0 754 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 TDP1Q9NUW8 608 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 THG1LQ9NWX6 298 aaKnown RBP10.75□□□□□ -0.69
LIN54-203ENST00000446851 CA14Q9ULX7 337 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 ATG2BQ96BY7 2078 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 CLUHO75153 1309 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 PAPSS1O43252 624 aaPredicted RBP10.75□□□□□ -0.69
LIN54-203ENST00000446851 LTBRP36941 435 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 TNK2Q07912 1038 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 KCNT1Q5JUK3 1230 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 SYPL2Q5VXT5 272 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 TADA2BQ86TJ2 420 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 CCDC33Q8N5R6 958 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 SHKBP1Q8TBC3 707 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 RPP25Q9BUL9 199 aaKnown RBP10.75□□□□□ -0.69
LIN54-203ENST00000446851 SLC46A2Q9BY10 475 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 GPATCH2LQ9NWQ4 482 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.75□□□□□ -0.699e-9■■■■■ 32.5
LIN54-203ENST00000446851 DNMT3LQ9UJW3 386 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 ASB3Q9Y575 518 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 DDX3XO00571 662 aaKnown RBP eCLIP10.75□□□□□ -0.699e-10■■■■□ 22.6
LIN54-203ENST00000446851 CTNNA2P26232 953 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 GBP1P32455 592 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 UBXN2BQ14CS0 331 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 RFWD3Q6PCD5 774 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 DAAM2Q86T65 1068 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 C17orf53Q8N3J3 647 aaPredicted RBP10.75□□□□□ -0.69
LIN54-203ENST00000446851 TC2NQ8N9U0 490 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 MYADMQ96S97 322 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 CIPCQ9C0C6 399 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 ABCB6Q9NP58 842 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 LMCD1Q9NZU5 365 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 CCL26Q9Y258 94 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 SPTBN2O15020 2390 aa10.75□□□□□ -0.69
LIN54-203ENST00000446851 PRPSAP2O60256 369 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 LILRB3O75022 631 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 ENDOD1O94919 500 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 TRUB2O95900 331 aaKnown RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 PGFP49763 221 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 TBX4P57082 545 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 RPL7AP62424 266 aaKnown RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 KAZNQ674X7 775 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 TRIM72Q6ZMU5 477 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 IRF2BP2Q7Z5L9 587 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 CFAP52Q8N1V2 620 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 HSFY1Q96LI6 401 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 NECTIN4Q96NY8 510 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 RPRD1AQ96P16 312 aaPredicted RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 DHX35Q9H5Z1 703 aaKnown RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 WDCPQ9H6R7 721 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 FSD2A1L4K1 749 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 ZNF263O14978 683 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 RFC1P35251 1148 aaPredicted RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 ATXN1P54253 815 aaKnown RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 PARM1Q6UWI2 310 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 IQCDQ96DY2 449 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 TRMT61BQ9BVS5 477 aaKnown RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 TRIM7Q9C029 511 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 TASP1Q9H6P5 420 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 POPDC2Q9HBU9 364 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 GTSE1Q9NYZ3 720 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 CYTH4Q9UIA0 394 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 HEPACAM2A8MVW5 462 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 MBTPS2O43462 519 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 FLT3P36888 993 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 TERF1P54274 439 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 DYNLT1P63172 113 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 NOMO3P69849 1222 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 KRT83P78385 493 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 KRT81Q14533 505 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 CLEC16AQ2KHT3 1053 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 ACCSLQ4AC99 568 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 ARHGAP17Q68EM7 881 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 TANGO2Q6ICL3 276 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 ACAD10Q6JQN1 1059 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 TFAP2DQ7Z6R9 452 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 NPAS3Q8IXF0 933 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 GJD3Q8N144 294 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 CCAR2Q8N163 923 aaKnown RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 ARHGAP18Q8N392 663 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 C8orf48Q96LL4 319 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 MRPL47Q9HD33 250 aaKnown RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 WDR6Q9NNW5 1121 aaKnown RBP10.74□□□□□ -0.69
LIN54-203ENST00000446851 CNGB3Q9NQW8 809 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 CDH7Q9ULB5 785 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 NUMBLQ9Y6R0 609 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 ZNF840PA6NDX5 716 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 C2CD4DB7Z1M9 353 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 NEDD8-MDP1E9PL57 170 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 COCHO43405 550 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 NDUFA10O95299 355 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 MAP3K6O95382 1288 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 CYBBP04839 570 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 GPC5P78333 572 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 COG7P83436 770 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 SLC6A3Q01959 620 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 WDR59Q6PJI9 974 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 PDZD8Q8NEN9 1154 aa10.74□□□□□ -0.69
LIN54-203ENST00000446851 RNF38Q9H0F5 515 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms