RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 OPRD1P41143 372 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 FNTBP49356 437 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 SEC13P55735 322 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 KDSRQ06136 332 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 GAB4Q2WGN9 574 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 FBXO43Q4G163 708 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 RHBDF2Q6PJF5 856 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 ARHGAP18Q8N392 663 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 RPLP0P6Q8NHW5 317 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 EZH1Q92800 747 aaPredicted RBP22.13■■□□□ 1.13
CDKN3-204ENST00000442975 NELL1Q92832 810 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 OTUB2Q96DC9 234 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 KREMEN1Q96MU8 473 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 CDK5RAP1Q96SZ6 601 aaKnown RBP22.13■■□□□ 1.13
CDKN3-204ENST00000442975 UBXN6Q9BZV1 441 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 CLIC5Q9NZA1 410 aa22.13■■□□□ 1.13
CDKN3-204ENST00000442975 HELZP42694 1942 aaKnown RBP22.13■■□□□ 1.13
CDKN3-204ENST00000442975 GOLGA6L22H0YM25 854 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 K7ESF4 209 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 RNF225M0QZC1 329 aaPredicted RBP22.12■■□□□ 1.13
CDKN3-204ENST00000442975 ATG13O75143 517 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 PAPSS2O95340 614 aaPredicted RBP22.12■■□□□ 1.13
CDKN3-204ENST00000442975 ZBED1O96006 694 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 RGS7P49802 495 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 YWHAGP61981 247 aaKnown RBP eCLIP22.12■■□□□ 1.13
CDKN3-204ENST00000442975 EFEMP1Q12805 493 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 ANO4Q32M45 955 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 HSP90AA4PQ58FG1 418 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 RAB41Q5JT25 222 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 KLHDC10Q6PID8 442 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 LCLAT1Q6UWP7 414 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 C12orf40Q86WS4 652 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 NDRG1Q92597 394 aaKnown RBP22.12■■□□□ 1.13
CDKN3-204ENST00000442975 UBE2TQ9NPD8 197 aaPredicted RBP22.12■■□□□ 1.13
CDKN3-204ENST00000442975 POLR3BQ9NW08 1133 aaPredicted RBP22.12■■□□□ 1.13
CDKN3-204ENST00000442975 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.12■■□□□ 1.13
CDKN3-204ENST00000442975 SMG5Q9UPR3 1016 aaKnown RBP22.12■■□□□ 1.13
CDKN3-204ENST00000442975 SLC8A2Q9UPR5 921 aa22.12■■□□□ 1.13
CDKN3-204ENST00000442975 HOXC13P31276 330 aa22.11■■□□□ 1.13
CDKN3-204ENST00000442975 PLA2G4AP47712 749 aa22.11■■□□□ 1.13
CDKN3-204ENST00000442975 SLC6A11P48066 632 aa22.11■■□□□ 1.13
CDKN3-204ENST00000442975 ZNF132P52740 706 aa22.11■■□□□ 1.13
CDKN3-204ENST00000442975 BTBD8Q5XKL5 378 aa22.11■■□□□ 1.13
CDKN3-204ENST00000442975 IRF2BP1Q8IU81 584 aa22.11■■□□□ 1.13
CDKN3-204ENST00000442975 FAM114A1Q8IWE2 563 aa22.11■■□□□ 1.13
CDKN3-204ENST00000442975 SECISBP2LQ93073 1101 aaKnown RBP22.11■■□□□ 1.13
CDKN3-204ENST00000442975 ZSWIM1Q9BR11 485 aa22.11■■□□□ 1.13
CDKN3-204ENST00000442975 THAP9Q9H5L6 903 aa22.11■■□□□ 1.13
CDKN3-204ENST00000442975 PIK3R2O00459 728 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 LILRB5O75023 590 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 HMBSP08397 361 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 LCP1P13796 627 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 PXNP49023 591 aaPredicted RBP22.1■■□□□ 1.13
CDKN3-204ENST00000442975 GAD2Q05329 585 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 STILQ15468 1287 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 GJB7Q6PEY0 223 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 TRIM65Q6PJ69 517 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 GBP6Q6ZN66 633 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 GPT2Q8TD30 523 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 ACDQ96AP0 544 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 HHIPQ96QV1 700 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 PNKPQ96T60 521 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 EPC1Q9H2F5 836 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 ARHGEF4Q9NR80 690 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 SPHK2Q9NRA0 654 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 STRIP2Q9ULQ0 834 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 MYO16Q9Y6X6 1858 aa22.1■■□□□ 1.13
CDKN3-204ENST00000442975 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.09■■□□□ 1.13
CDKN3-204ENST00000442975 HOXC11O43248 304 aaPredicted RBP22.09■■□□□ 1.13
CDKN3-204ENST00000442975 GREM1O60565 184 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 ERCC5P28715 1186 aaPredicted RBP22.09■■□□□ 1.13
CDKN3-204ENST00000442975 USP8P40818 1118 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 APBA1Q02410 837 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 LPAL2Q16609 132 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 EXOC3L4Q17RC7 722 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 C2orf27AQ580R0 203 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 PRR23BQ6ZRT6 265 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 HTR3DQ70Z44 454 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 LONP2Q86WA8 852 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 TMEM25Q86YD3 366 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 NAT16Q8N8M0 369 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 CCDC26Q8TAB7 109 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 MARCH2Q9P0N8 246 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 NCDNQ9UBB6 729 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 GPR179Q6PRD1 2367 aa22.09■■□□□ 1.13
CDKN3-204ENST00000442975 NEDD8-MDP1E9PL57 170 aa22.08■■□□□ 1.13
CDKN3-204ENST00000442975 PES1O00541 588 aaKnown RBP22.08■■□□□ 1.13
CDKN3-204ENST00000442975 STC2O76061 302 aa22.08■■□□□ 1.13
CDKN3-204ENST00000442975 KAT7O95251 611 aa22.08■■□□□ 1.13
CDKN3-204ENST00000442975 APODP05090 189 aa22.08■■□□□ 1.13
CDKN3-204ENST00000442975 PRKCSHP14314 528 aaPredicted RBP22.08■■□□□ 1.13
CDKN3-204ENST00000442975 SLC9A1P19634 815 aa22.08■■□□□ 1.13
CDKN3-204ENST00000442975 MFAP3P55082 362 aa22.08■■□□□ 1.13
CDKN3-204ENST00000442975 MESP2Q0VG99 397 aa22.08■■□□□ 1.13
CDKN3-204ENST00000442975 SRSF5Q13243 272 aaKnown RBP22.08■■□□□ 1.13
CDKN3-204ENST00000442975 CNGA2Q16280 664 aa22.08■■□□□ 1.13
CDKN3-204ENST00000442975 MAN2A1Q16706 1144 aa22.08■■□□□ 1.13
CDKN3-204ENST00000442975 ARHGAP44Q17R89 818 aa22.08■■□□□ 1.13
CDKN3-204ENST00000442975 PKDCCQ504Y2 493 aa22.08■■□□□ 1.13
CDKN3-204ENST00000442975 TPGS1Q6ZTW0 290 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms