RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 PKDCCQ504Y2 493 aa23.27■■□□□ 1.32
HDLBP-220ENST00000442730 C10orf120Q5SQS8 335 aa23.27■■□□□ 1.32
HDLBP-220ENST00000442730 LCLAT1Q6UWP7 414 aa23.27■■□□□ 1.32
HDLBP-220ENST00000442730 ZNF276Q8N554 614 aa23.27■■□□□ 1.32
HDLBP-220ENST00000442730 RBBP8NLQ8NC74 664 aaPredicted RBP23.27■■□□□ 1.32
HDLBP-220ENST00000442730 DNMT3LQ9UJW3 386 aa23.27■■□□□ 1.32
HDLBP-220ENST00000442730 OTOGLQ3ZCN5 2332 aa23.27■■□□□ 1.32
HDLBP-220ENST00000442730 EP300Q09472 2414 aaPredicted RBP23.26■■□□□ 1.31
HDLBP-220ENST00000442730 CHURC1-FNTBB4DL54 471 aa23.26■■□□□ 1.31
HDLBP-220ENST00000442730 SETSIPP0DME0 302 aa23.26■■□□□ 1.31
HDLBP-220ENST00000442730 ADH5P11766 374 aa23.26■■□□□ 1.31
HDLBP-220ENST00000442730 PLA2G4AP47712 749 aa23.26■■□□□ 1.31
HDLBP-220ENST00000442730 DMWDQ09019 674 aa23.26■■□□□ 1.31
HDLBP-220ENST00000442730 FBXO43Q4G163 708 aa23.26■■□□□ 1.31
HDLBP-220ENST00000442730 TADA2BQ86TJ2 420 aa23.26■■□□□ 1.31
HDLBP-220ENST00000442730 SUMF1Q8NBK3 374 aa23.26■■□□□ 1.31
HDLBP-220ENST00000442730 UBA3Q8TBC4 463 aa23.26■■□□□ 1.31
HDLBP-220ENST00000442730 EPC1Q9H2F5 836 aa23.26■■□□□ 1.31
HDLBP-220ENST00000442730 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.26■■□□□ 1.31
HDLBP-220ENST00000442730 KIAA1549LQ6ZVL6 1849 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 ZBED1O96006 694 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 CALCAP01258 141 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 RALAP11233 206 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 BRD2P25440 801 aaKnown RBP23.25■■□□□ 1.31
HDLBP-220ENST00000442730 HOXC13P31276 330 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 LY6G5CQ5SRR4 150 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 PM20D1Q6GTS8 502 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 TRIM65Q6PJ69 517 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 HTR3DQ70Z44 454 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 BHLHA9Q7RTU4 235 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 C12orf40Q86WS4 652 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 ARHGAP18Q8N392 663 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 CDK5RAP1Q96SZ6 601 aaKnown RBP23.25■■□□□ 1.31
HDLBP-220ENST00000442730 ULBP1Q9BZM6 244 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 CNTN6Q9UQ52 1028 aa23.25■■□□□ 1.31
HDLBP-220ENST00000442730 ATG13O75143 517 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 ERCC5P28715 1186 aaPredicted RBP23.24■■□□□ 1.31
HDLBP-220ENST00000442730 HOXA6P31267 233 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 EIF2DP41214 584 aaKnown RBP23.24■■□□□ 1.31
HDLBP-220ENST00000442730 YWHAGP61981 247 aaKnown RBP eCLIP23.24■■□□□ 1.31
HDLBP-220ENST00000442730 GOLGA8FQ08AF8 430 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 GOLGA8DPQ0D2H9 430 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 ADIGQ0VDE8 80 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 MESP2Q0VG99 397 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 MIB1Q86YT6 1006 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 CREBRFQ8IUR6 639 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 GPT2Q8TD30 523 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 KCTD13Q8WZ19 329 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 CRACR2AQ9BSW2 395 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 THAP9Q9H5L6 903 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 LRRC4Q9HBW1 653 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 DACH1Q9UI36 760 aa23.24■■□□□ 1.31
HDLBP-220ENST00000442730 M0QYV0 167 aa23.23■■□□□ 1.31
HDLBP-220ENST00000442730 HOXC11O43248 304 aaPredicted RBP23.23■■□□□ 1.31
HDLBP-220ENST00000442730 SLC6A11P48066 632 aa23.23■■□□□ 1.31
HDLBP-220ENST00000442730 FNTBP49356 437 aa23.23■■□□□ 1.31
HDLBP-220ENST00000442730 CNGA2Q16280 664 aa23.23■■□□□ 1.31
HDLBP-220ENST00000442730 TPD52L1Q16890 204 aaPredicted RBP23.23■■□□□ 1.31
HDLBP-220ENST00000442730 RPLP0P6Q8NHW5 317 aa23.23■■□□□ 1.31
HDLBP-220ENST00000442730 NDRG1Q92597 394 aaKnown RBP23.23■■□□□ 1.31
HDLBP-220ENST00000442730 SPHK2Q9NRA0 654 aa23.23■■□□□ 1.31
HDLBP-220ENST00000442730 LSM7Q9UK45 103 aaKnown RBP23.23■■□□□ 1.31
HDLBP-220ENST00000442730 SMG5Q9UPR3 1016 aaKnown RBP23.23■■□□□ 1.31
HDLBP-220ENST00000442730 PTPRZ1P23471 2315 aaPredicted RBP23.23■■□□□ 1.31
HDLBP-220ENST00000442730 K7EQS6 105 aa23.22■■□□□ 1.31
HDLBP-220ENST00000442730 MTIF2P46199 727 aaKnown RBP23.22■■□□□ 1.31
HDLBP-220ENST00000442730 GAD2Q05329 585 aa23.22■■□□□ 1.31
HDLBP-220ENST00000442730 STILQ15468 1287 aa23.22■■□□□ 1.31
HDLBP-220ENST00000442730 HEATR6Q6AI08 1181 aaKnown RBP23.22■■□□□ 1.31
HDLBP-220ENST00000442730 Q6ZNB5 142 aa23.22■■□□□ 1.31
HDLBP-220ENST00000442730 TMEM25Q86YD3 366 aa23.22■■□□□ 1.31
HDLBP-220ENST00000442730 SFTPA1Q8IWL2 248 aa23.22■■□□□ 1.31
HDLBP-220ENST00000442730 ETFBKMTQ8IXQ9 262 aa23.22■■□□□ 1.31
HDLBP-220ENST00000442730 SIX6OS1Q8N1H7 587 aa23.22■■□□□ 1.31
HDLBP-220ENST00000442730 SLC35F5Q8WV83 523 aa23.22■■□□□ 1.31
HDLBP-220ENST00000442730 SECISBP2LQ93073 1101 aaKnown RBP23.22■■□□□ 1.31
HDLBP-220ENST00000442730 UBE2TQ9NPD8 197 aaPredicted RBP23.22■■□□□ 1.31
HDLBP-220ENST00000442730 POLR3BQ9NW08 1133 aaPredicted RBP23.22■■□□□ 1.31
HDLBP-220ENST00000442730 RASAL2Q9UJF2 1139 aa23.22■■□□□ 1.31
HDLBP-220ENST00000442730 GTPBP10A4D1E9 387 aaKnown RBP23.21■■□□□ 1.31
HDLBP-220ENST00000442730 GABBR2O75899 941 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 STC2O76061 302 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 CHRM1P11229 460 aaPredicted RBP23.21■■□□□ 1.31
HDLBP-220ENST00000442730 KRT5P13647 590 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 SLC9A1P19634 815 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 APBA1Q02410 837 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 KDSRQ06136 332 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 EFEMP1Q12805 493 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 PMF1Q6P1K2 205 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 GJB7Q6PEY0 223 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 GBP6Q6ZN66 633 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 RSRC2Q7L4I2 434 aaKnown RBP23.21■■□□□ 1.31
HDLBP-220ENST00000442730 ENOSF1Q7L5Y1 443 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 LONP2Q86WA8 852 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 FAM114A1Q8IWE2 563 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 PHTF2Q8N3S3 785 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 USP33Q8TEY7 942 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 PNKPQ96T60 521 aa23.21■■□□□ 1.31
HDLBP-220ENST00000442730 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.2■■□□□ 1.3
HDLBP-220ENST00000442730 KAT7O95251 611 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms