RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 ZMYND8Q9ULU4 1186 aaPredicted RBP16.74■□□□□ 0.27
NLE1-202ENST00000442241 CXorf49A8MYA2 514 aaPredicted RBP16.73■□□□□ 0.27
NLE1-202ENST00000442241 PRPF4O43172 522 aaKnown RBP eCLIP16.73■□□□□ 0.278e-6■■■□□ 18.3
NLE1-202ENST00000442241 HOXA11P31270 313 aaPredicted RBP16.73■□□□□ 0.27
NLE1-202ENST00000442241 ATICP31939 592 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 EPHX2P34913 555 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 GRIA1P42261 906 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 GBE1Q04446 702 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 BLMHQ13867 455 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 FAM187BQ17R55 369 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 OLFML1Q6UWY5 402 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 OTOAQ7RTW8 1153 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 CATSPER4Q7RTX7 472 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 TDRPQ86YL5 185 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 PYROXD2Q8N2H3 581 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 ZNF75CPQ92670 426 aaPredicted RBP16.73■□□□□ 0.27
NLE1-202ENST00000442241 CEP41Q9BYV8 373 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 CYP3A43Q9HB55 503 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 USP29Q9HBJ7 922 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 CHKBQ9Y259 395 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 PHBP35232 272 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 BCAR1P56945 870 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 ZNF200P98182 395 aaPredicted RBP16.73■□□□□ 0.27
NLE1-202ENST00000442241 SNAPC2Q13487 334 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 OR6J1Q8NGC5 347 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 NFKBIZQ9BYH8 718 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 RNF39Q9H2S5 420 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 DHX35Q9H5Z1 703 aaKnown RBP16.73■□□□□ 0.27
NLE1-202ENST00000442241 ACSS3Q9H6R3 686 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 PCDH18Q9HCL0 1135 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 ITGA11Q9UKX5 1188 aa16.73■□□□□ 0.27
NLE1-202ENST00000442241 DICER1Q9UPY3 1922 aaKnown RBP16.72■□□□□ 0.27
NLE1-202ENST00000442241 A8MXQ7 604 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 MAGEB2O15479 319 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 CBX6O95503 412 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 INCA1Q0VD86 236 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 PTK7Q13308 1070 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 BMPR2Q13873 1038 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 HIC1Q14526 733 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 PDK4Q16654 411 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 CEP128Q6ZU80 1094 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 LRRC6Q86X45 466 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 PPM1NQ8N819 430 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 RFWD2Q8NHY2 731 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 TTC17Q96AE7 1141 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 ETNK1Q9HBU6 452 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 SLC24A2Q9UI40 661 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 BTBD19C9JJ37 291 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 DYNC1LI2O43237 492 aaPredicted RBP16.72■□□□□ 0.27
NLE1-202ENST00000442241 PYGBP11216 843 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 SDC4P31431 198 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 HDAC4P56524 1084 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 SLC10A2Q12908 348 aaPredicted RBP16.72■□□□□ 0.27
NLE1-202ENST00000442241 PLEKHG4Q58EX7 1191 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 ADGRD1Q6QNK2 874 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 VSIG1Q86XK7 387 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 MPP5Q8N3R9 675 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 MZB1Q8WU39 189 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 PGLYRP2Q96PD5 576 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 FAM111AQ96PZ2 611 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 SPATS2LQ9NUQ6 558 aaKnown RBP16.72■□□□□ 0.27
NLE1-202ENST00000442241 CLEC11AQ9Y240 323 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 EFR3BQ9Y2G0 817 aa16.72■□□□□ 0.27
NLE1-202ENST00000442241 MYO18AQ92614 2054 aaKnown RBP16.71■□□□□ 0.27
NLE1-202ENST00000442241 SPTLC1O15269 473 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 EDF1O60869 148 aaKnown RBP16.71■□□□□ 0.27
NLE1-202ENST00000442241 ZBED1O96006 694 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 CDC25CP30307 473 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 PCK1P35558 622 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 NR1H3Q13133 447 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 KCNJ11Q14654 390 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 SOWAHAQ2M3V2 549 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 ANKRD20A2Q5SQ80 823 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 ANKRD20A1Q5TYW2 823 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 ANKRD20A3Q5VUR7 823 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 KATNBL1Q9H079 304 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 ETNK2Q9NVF9 386 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 SLC17A6Q9P2U8 582 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 PLXNA1Q9UIW2 1896 aa16.71■□□□□ 0.27
NLE1-202ENST00000442241 EME2A4GXA9 379 aaPredicted RBP16.71■□□□□ 0.26
NLE1-202ENST00000442241 APOL1O14791 398 aa16.71■□□□□ 0.26
NLE1-202ENST00000442241 TOP3BO95985 862 aaKnown RBP16.71■□□□□ 0.26
NLE1-202ENST00000442241 MT-ND3P03897 115 aa16.71■□□□□ 0.26
NLE1-202ENST00000442241 MMP3P08254 477 aa16.71■□□□□ 0.26
NLE1-202ENST00000442241 CRADDP78560 199 aa16.71■□□□□ 0.26
NLE1-202ENST00000442241 SLC6A3Q01959 620 aa16.71■□□□□ 0.26
NLE1-202ENST00000442241 EGFL6Q8IUX8 553 aa16.71■□□□□ 0.26
NLE1-202ENST00000442241 UNC5BQ8IZJ1 945 aa16.71■□□□□ 0.26
NLE1-202ENST00000442241 CCDC185Q8N715 623 aa16.71■□□□□ 0.26
NLE1-202ENST00000442241 LBHD1Q9BQE6 289 aaPredicted RBP16.71■□□□□ 0.26
NLE1-202ENST00000442241 SMG5Q9UPR3 1016 aaKnown RBP16.71■□□□□ 0.26
NLE1-202ENST00000442241 A6NHS1 94 aa16.7■□□□□ 0.26
NLE1-202ENST00000442241 E7ESA3 106 aa16.7■□□□□ 0.26
NLE1-202ENST00000442241 RECQL4O94761 1208 aa16.7■□□□□ 0.26
NLE1-202ENST00000442241 METTL18O95568 372 aa16.7■□□□□ 0.26
NLE1-202ENST00000442241 NEFHP12036 1026 aa16.7■□□□□ 0.26
NLE1-202ENST00000442241 ABL2P42684 1182 aa16.7■□□□□ 0.26
NLE1-202ENST00000442241 YWHAZP63104 245 aaKnown RBP16.7■□□□□ 0.26
NLE1-202ENST00000442241 PITX1P78337 314 aaPredicted RBP16.7■□□□□ 0.26
NLE1-202ENST00000442241 CCDC125Q86Z20 511 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms