RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 EPAS1Q99814 870 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 AP1M1Q9BXS5 423 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 ZCWPW1Q9H0M4 648 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 DPYSL4O14531 572 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 HSF2BPO75031 334 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 SMNDC1O75940 238 aaKnown RBP eCLIP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 KRT7P08729 469 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 OR4Q2P0C623 313 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 TPP2P29144 1249 aaPredicted RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 CACNA2D1P54289 1103 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 MRPS5P82675 430 aaKnown RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 ROR2Q01974 943 aaKnown RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 PPIGQ13427 754 aaKnown RBP eCLIP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 MRPL58Q14197 206 aaKnown RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 BTG3Q14201 252 aaPredicted RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 SLC39A12Q504Y0 691 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 ACBD5Q5T8D3 534 aaPredicted RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 AADACL2Q6P093 401 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 OTOP2Q7RTS6 562 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 POLNQ7Z5Q5 900 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 TMEM173Q86WV6 379 aaPredicted RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 EXD1Q8NHP7 514 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 RHOBTB2Q9BYZ6 727 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 EPC1Q9H2F5 836 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 CWH43Q9H720 699 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 CNGB3Q9NQW8 809 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 TMEM30AQ9NV96 361 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 DDX56Q9NY93 547 aaKnown RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 CORO1CQ9ULV4 474 aaPredicted RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 H7C4K7 107 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 TPD52L2O43399 206 aaKnown RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 GLI1P08151 1106 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 TCF4P15884 667 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 PCK1P35558 622 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 ADCY1Q08828 1119 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 CEP85LQ5SZL2 805 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 TRNP1Q6NT89 227 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 C8orf74Q6P047 294 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 ANKS3Q6ZW76 656 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 SLC13A5Q86YT5 568 aaPredicted RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 C17orf50Q8WW18 174 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 ZNF689Q96CS4 500 aaPredicted RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 FUBP3Q96I24 572 aaKnown RBP eCLIP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 RBM41Q96IZ5 413 aaKnown RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 CFAP57Q96MR6 1250 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 TTPALQ9BTX7 342 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 ULBP1Q9BZM6 244 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 PNPLA8Q9NP80 782 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 NGRNQ9NPE2 291 aaKnown RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 MTUS1Q9ULD2 1270 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 CARNS1A5YM72 827 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 ZBBXA8MT70 800 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 SKAP2O75563 359 aaPredicted RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 FGBP02675 491 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 KRT1P04264 644 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 TUBBP07437 444 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 EZRP15311 586 aaKnown RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 NAT1P18440 290 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 MIPP30301 263 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 PTPN9P43378 593 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 NDUFV1P49821 464 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 YWHAZP63104 245 aaKnown RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 ATP11AP98196 1134 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 PPP2R5EQ16537 467 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 CDO1Q16878 200 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 C15orf59Q2T9L4 293 aaPredicted RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 CCDC14Q49A88 953 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 RAB41Q5JT25 222 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 KCNT2Q6UVM3 1135 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 ADAT2Q7Z6V5 191 aaKnown RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 TMCO2Q7Z6W1 182 aaPredicted RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 KLHL7Q8IXQ5 586 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 CMTR2Q8IYT2 770 aaKnown RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 RCOR2Q8IZ40 523 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 ARFGAP1Q8N6T3 406 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 BCL7CQ8WUZ0 217 aaPredicted RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 MAIP1Q8WWC4 291 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 IGSF21Q96ID5 467 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 B3GALT6Q96L58 329 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 ZNF558Q96NG5 402 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 YME1L1Q96TA2 773 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 KRT12Q99456 494 aa8.43□□□□□ -1.06
CCDC39-201ENST00000442201 OXCT2Q9BYC2 517 aaPredicted RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 ABI2Q9NYB9 513 aaPredicted RBP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.43□□□□□ -1.06
CCDC39-201ENST00000442201 HHLA1C9JL84 531 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 CPB1P15086 417 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 GRIK1P39086 918 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 DAOAP59103 153 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 SLC25A11Q02978 314 aaKnown RBP8.42□□□□□ -1.06
CCDC39-201ENST00000442201 FPGSQ05932 587 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 USP41Q3LFD5 358 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 ATP13A4Q4VNC1 1196 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 GLE1Q53GS7 698 aaKnown RBP8.42□□□□□ -1.06
CCDC39-201ENST00000442201 RTP2Q5QGT7 225 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 ARHGAP22Q7Z5H3 698 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 FAM172AQ8WUF8 416 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 BADQ92934 168 aa8.42□□□□□ -1.06
CCDC39-201ENST00000442201 RNF25Q96BH1 459 aaPredicted RBP8.42□□□□□ -1.06
CCDC39-201ENST00000442201 LRRC1Q9BTT6 524 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms