RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.21□□□□□ -1.1
CD44-211ENST00000442151 FAM92AA1XBS5 289 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 CLDN5O00501 218 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 NPC1O15118 1278 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 ZNF202O95125 648 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 TGM1P22735 817 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 CASP1P29466 404 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 SLC5A3P53794 718 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 COPS2P61201 443 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 USP46P62068 366 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 COG7P83436 770 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 DAB2IPQ5VWQ8 1189 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 SLC36A4Q6YBV0 504 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 KIAA0895Q8NCT3 520 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 WHAMMQ8TF30 809 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 CNOT6LQ96LI5 555 aaKnown RBP8.21□□□□□ -1.1
CD44-211ENST00000442151 RNF38Q9H0F5 515 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 DPEP3Q9H4B8 488 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 SMYD3Q9H7B4 428 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 SMPD4Q9NXE4 827 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 DNMT3LQ9UJW3 386 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 KIAA1257Q9ULG3 409 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 STRIP2Q9ULQ0 834 aa8.21□□□□□ -1.1
CD44-211ENST00000442151 OTOL1A6NHN0 477 aaPredicted RBP8.2□□□□□ -1.1
CD44-211ENST00000442151 TNFRSF10BO14763 440 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 KHNYNO15037 678 aaKnown RBP8.2□□□□□ -1.1
CD44-211ENST00000442151 HOXC11O43248 304 aaPredicted RBP8.2□□□□□ -1.1
CD44-211ENST00000442151 COCHO43405 550 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 HCRTO43612 131 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 TLR5O60602 858 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 KAT7O95251 611 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 CAVIN2O95810 425 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 ZDHHC11BP0C7U3 371 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 GBP1P32455 592 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 CHKAP35790 457 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 CASP4P49662 377 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 SMCPP49901 116 aaPredicted RBP8.2□□□□□ -1.1
CD44-211ENST00000442151 NDUFA8P51970 172 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 ZNF132P52740 706 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 MAP3K7CLP57077 242 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 DMWDQ09019 674 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 INCA1Q0VD86 236 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 DPYDQ12882 1025 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 ANO4Q32M45 955 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 PLK5Q496M5 336 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 LIAT1Q6ZQX7 453 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 HTR3DQ70Z44 454 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 LPCAT2Q7L5N7 544 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 KBTBD6Q86V97 674 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 GRAMD1CQ8IYS0 662 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 FUKQ8N0W3 1084 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 PGBD3Q8N328 593 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 SLC2A14Q8TDB8 520 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 UCMAQ8WVF2 138 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 GSDMAQ96QA5 445 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 NIF3L1Q9GZT8 377 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 METTL14Q9HCE5 456 aaKnown RBP8.2□□□□□ -1.1
CD44-211ENST00000442151 PARD6AQ9NPB6 346 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 SPHK2Q9NRA0 654 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 KRT82Q9NSB4 513 aa8.2□□□□□ -1.1
CD44-211ENST00000442151 BCCIPQ9P287 314 aaKnown RBP eCLIP8.2□□□□□ -1.1
CD44-211ENST00000442151 K7EQS6 105 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 ZNF217O75362 1048 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 VNN1O95497 513 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 CYBBP04839 570 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 CYP17A1P05093 508 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 RDXP35241 583 aaKnown RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 MPLP40238 635 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 OPRD1P41143 372 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 ZNF445P59923 1031 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 FKBP3Q00688 224 aaKnown RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 LMAN2Q12907 356 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 CRY1Q16526 586 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 C2orf27AQ580R0 203 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 GRAMD4Q6IC98 578 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 RHBDF2Q6PJF5 856 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 SCARA5Q6ZMJ2 495 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 FBXL13Q8NEE6 735 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 HEXIM2Q96MH2 286 aaKnown RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 HHIPQ96QV1 700 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 KCNK16Q96T55 309 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 DUSP16Q9BY84 665 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 FBRSL1Q9HCM7 1045 aaKnown RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 CYLDQ9NQC7 956 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 OLA1Q9NTK5 396 aaKnown RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 CLIC5Q9NZA1 410 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 GMIPQ9P107 970 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 HESX1Q9UBX0 185 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 BCLAF3A2AJT9 711 aaKnown RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 DCDC2BA2VCK2 349 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 GFRA2O00451 464 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 SLC16A3O15427 465 aaKnown RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 TIMM44O43615 452 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 KLF8O95600 359 aaPredicted RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 FGFR1OPO95684 399 aaKnown RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 TBXAS1P24557 533 aaPredicted RBP8.19□□□□□ -1.1
CD44-211ENST00000442151 HOXD12P35452 270 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 GCLMP48507 274 aa8.19□□□□□ -1.1
CD44-211ENST00000442151 SEC13P55735 322 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms