RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 CFAP57Q96MR6 1250 aa16.62■□□□□ 0.25
MCF2L-217ENST00000441756 OSBPL9Q96SU4 736 aa16.62■□□□□ 0.25
MCF2L-217ENST00000441756 CARD9Q9H257 536 aa16.62■□□□□ 0.25
MCF2L-217ENST00000441756 PLEKHA4Q9H4M7 779 aa16.62■□□□□ 0.25
MCF2L-217ENST00000441756 OLA1Q9NTK5 396 aaKnown RBP16.62■□□□□ 0.25
MCF2L-217ENST00000441756 CLIC5Q9NZA1 410 aa16.62■□□□□ 0.25
MCF2L-217ENST00000441756 RNF14Q9UBS8 474 aa16.62■□□□□ 0.25
MCF2L-217ENST00000441756 CDC23Q9UJX2 597 aa16.62■□□□□ 0.25
MCF2L-217ENST00000441756 PACSIN2Q9UNF0 486 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-217ENST00000441756 PCDHA3Q9Y5H8 950 aa16.62■□□□□ 0.25
MCF2L-217ENST00000441756 MYO16Q9Y6X6 1858 aa16.62■□□□□ 0.25
MCF2L-217ENST00000441756 A0A1W2PPC1 479 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 HIDE1A8MVS5 230 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 KCNK3O14649 394 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 FANCGO15287 622 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 PRPSAP2O60256 369 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 LRCH4O75427 683 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 SLC34A2O95436 690 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 F9P00740 461 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 RALAP11233 206 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 GBP1P32455 592 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 PPP3CCP48454 512 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 DNA2P51530 1060 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 ATP11AP98196 1134 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 AMPD2Q01433 879 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 CKAP4Q07065 602 aaKnown RBP16.61■□□□□ 0.25
MCF2L-217ENST00000441756 TWF1Q12792 350 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 CDO1Q16878 200 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 WHAMMP3Q1A5X7 153 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 SEL1L2Q5TEA6 688 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 SND1Q7KZF4 910 aaKnown RBP eCLIP16.61■□□□□ 0.25
MCF2L-217ENST00000441756 BHLHA9Q7RTU4 235 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 TADA2BQ86TJ2 420 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 SLC7A14Q8TBB6 771 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 GIPC2Q8TF65 315 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 FAM172AQ8WUF8 416 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 ARNTL2Q8WYA1 636 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 RBM41Q96IZ5 413 aaKnown RBP16.61■□□□□ 0.25
MCF2L-217ENST00000441756 TBCBQ99426 244 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 NPY6RQ99463 290 aa16.61■□□□□ 0.25
MCF2L-217ENST00000441756 DDX3YO15523 660 aaKnown RBP16.6■□□□□ 0.25
MCF2L-217ENST00000441756 C8AP07357 584 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 RDXP35241 583 aaKnown RBP16.6■□□□□ 0.25
MCF2L-217ENST00000441756 CLCN4P51793 760 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 C15orf59Q2T9L4 293 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-217ENST00000441756 ZFYVE27Q5T4F4 411 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 CCDC181Q5TID7 509 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 TRNP1Q6NT89 227 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 HFE2Q6ZVN8 426 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 RSRC2Q7L4I2 434 aaKnown RBP16.6■□□□□ 0.25
MCF2L-217ENST00000441756 SPRED2Q7Z698 418 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 KATNAL2Q8IYT4 538 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 STKLD1Q8NE28 680 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 GPR152Q8TDT2 470 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 NDRG1Q92597 394 aaKnown RBP16.6■□□□□ 0.25
MCF2L-217ENST00000441756 CENPIQ92674 756 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-217ENST00000441756 NT5C3BQ969T7 300 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 PSMG2Q969U7 264 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 PGAP3Q96FM1 320 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-217ENST00000441756 MYRFLQ96LU7 910 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 FAM204AQ9H8W3 233 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 GMIPQ9P107 970 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 USP18Q9UMW8 372 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 MAGED2Q9UNF1 606 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-217ENST00000441756 MRFAP1Q9Y605 127 aa16.6■□□□□ 0.25
MCF2L-217ENST00000441756 COL4A4P53420 1690 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-217ENST00000441756 A0A1W2PQH9 124 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 CSPG5O95196 566 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 MIPP30301 263 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 HOXA9P31269 272 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 IRS1P35568 1242 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 GJC1P36383 396 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 PAFAH1B1P43034 410 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 AIF1P55008 147 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 USP46P62068 366 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 DEUP1Q05D60 604 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 TAF10Q12962 218 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 CAMK1Q14012 370 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 PPM1LQ5SGD2 360 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 MSANTD2Q6P1R3 559 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 CHRDL2Q6WN34 429 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 MNS1Q8NEH6 495 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 TEKT4Q8WW24 435 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 EDEM1Q92611 657 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 ZNF512Q96ME7 567 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-217ENST00000441756 SERPINB11Q96P15 392 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 PSMB7Q99436 277 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 NAP1L3Q99457 506 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-217ENST00000441756 CDCA3Q99618 268 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-217ENST00000441756 SMOC2Q9H3U7 446 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 TRPM5Q9NZQ8 1165 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 NAALADL1Q9UQQ1 740 aa16.59■□□□□ 0.25
MCF2L-217ENST00000441756 SPDYE4A6NLX3 237 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 M0QYT0 321 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 CLASP2O75122 1294 aaKnown RBP16.58■□□□□ 0.24
MCF2L-217ENST00000441756 ENDOD1O94919 500 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 FGF19O95750 216 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 KRT1P04264 644 aa16.58■□□□□ 0.24
MCF2L-217ENST00000441756 HNRNPA1P09651 372 aaKnown RBP eCLIP16.58■□□□□ 0.24
MCF2L-217ENST00000441756 PEX5P50542 639 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms