RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 CHTF18Q8WVB6 975 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 GATA6Q92908 595 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 GRAMD1AQ96CP6 724 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 CINPQ9BW66 212 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-206ENST00000441438 PUS3Q9BZE2 481 aaKnown RBP10.97□□□□□ -0.65
SYNE2-206ENST00000441438 TTYH3Q9C0H2 523 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 UNC93B1Q9H1C4 597 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 IFT22Q9H7X7 185 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 TMEM206Q9H813 350 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 SLC35D1Q9NTN3 355 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 PCDHGA9Q9Y5G4 932 aaKnown RBP10.97□□□□□ -0.65
SYNE2-206ENST00000441438 PCDHGA8Q9Y5G5 932 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 PCDHGA7Q9Y5G6 932 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 PCDHGA6Q9Y5G7 932 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 PCDHGA3Q9Y5H0 932 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 DMRT1Q9Y5R6 373 aa10.97□□□□□ -0.65
SYNE2-206ENST00000441438 XKRY2A2RUG3 117 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 PLD2O14939 933 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 HNRNPRO43390 633 aaKnown RBP10.96□□□□□ -0.65
SYNE2-206ENST00000441438 TLL1O43897 1013 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 RAC3P60763 192 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 CHIT1Q13231 466 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 SLC39A12Q504Y0 691 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 CYP4F22Q6NT55 531 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 METTL2BQ6P1Q9 378 aaKnown RBP10.96□□□□□ -0.65
SYNE2-206ENST00000441438 DEGS2Q6QHC5 323 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 ACSF2Q96CM8 615 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-206ENST00000441438 C7orf34Q96L11 122 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 C12orf4Q9NQ89 552 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 BATF3Q9NR55 127 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 RUVBL1Q9Y265 456 aaKnown RBP10.96□□□□□ -0.65
SYNE2-206ENST00000441438 RIC1Q4ADV7 1423 aa10.96□□□□□ -0.65
SYNE2-206ENST00000441438 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.96□□□□□ -0.66
SYNE2-206ENST00000441438 H3BQV1 296 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 PYGMP11217 842 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 TIMP2P16035 220 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 TBXAS1P24557 533 aaPredicted RBP10.96□□□□□ -0.66
SYNE2-206ENST00000441438 TRHRP34981 398 aaPredicted RBP10.96□□□□□ -0.66
SYNE2-206ENST00000441438 HSPA13P48723 471 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 KCNC3Q14003 757 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 STARD3Q14849 445 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 UGP2Q16851 508 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 UNC13DQ70J99 1090 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 GLRX5Q86SX6 157 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 MAP7D3Q8IWC1 876 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 DNAJC10Q8IXB1 793 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 ST13P4Q8IZP2 240 aaPredicted RBP10.96□□□□□ -0.66
SYNE2-206ENST00000441438 ANKFN1Q8N957 763 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 VWCEQ96DN2 955 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 JMJD4Q9H9V9 463 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 PARVBQ9HBI1 364 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 MID1IP1Q9NPA3 183 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 DMRT3Q9NQL9 472 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 GALNT8Q9NY28 637 aa10.96□□□□□ -0.66
SYNE2-206ENST00000441438 PER2O15055 1255 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 CHRM3P20309 590 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 CRKLP46109 303 aaKnown RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 NEK4P51957 841 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 PTPN5P54829 565 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 FAM110CQ1W6H9 321 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 ZACNQ401N2 412 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 SRGAP1Q7Z6B7 1085 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 STX12Q86Y82 276 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 MPP5Q8N3R9 675 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 BANPQ8N9N5 519 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 ANKRD2Q9GZV1 360 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 NDST4Q9H3R1 872 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 RC3H2Q9HBD1 1191 aaKnown RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 IL1RAPL2Q9NP60 686 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 NRIP3Q9NQ35 241 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 SH3GLB1Q9Y371 365 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 ATP23Q9Y6H3 246 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 CCDC162PA2VCL2 907 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 SNPHO15079 494 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 GGPS1O95749 300 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 MLYCDO95822 493 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 ACAA1P09110 424 aaPredicted RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 ARAFP10398 606 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 EIF6P56537 245 aaKnown RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 GPX6P59796 221 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 ASIC1P78348 528 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 ENPEPQ07075 957 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 GRIN2CQ14957 1233 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 SF3B4Q15427 424 aaKnown RBP eCLIP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 GRIK5Q16478 980 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 FAM209BQ5JX69 171 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 PIK3R6Q5UE93 754 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 PALB2Q86YC2 1186 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 DENND6AQ8IWF6 608 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 CCDC63Q8NA47 563 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 GLB1L3Q8NCI6 653 aaPredicted RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 HIPK4Q8NE63 616 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 KLHDC4Q8TBB5 520 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 TRAPPC12Q8WVT3 735 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 RFFLQ8WZ73 363 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 ABHD17AQ96GS6 310 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 JPH2Q9BR39 696 aaPredicted RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 MOV10L1Q9BXT6 1211 aaKnown RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 NEK6Q9HC98 313 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 PREBQ9HCU5 417 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms