RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 LPIN3Q9BQK8 851 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 PCDH9Q9HC56 1237 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 FAM49BQ9NUQ9 324 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 CDH9Q9ULB4 789 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 PTCH2Q9Y6C5 1203 aa13.75□□□□□ -0.21
ACTN4-204ENST00000440400 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-204ENST00000440400 C9IYK1 514 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 HHLA1C9JL84 531 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 PI4K2BG5E9Z4 385 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 RNF8O76064 485 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 PDGFRAP16234 1089 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 NR1D1P20393 614 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 PLTPP55058 493 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 HDAC4P56524 1084 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 SLC8A3P57103 927 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 PPP1R7Q15435 360 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 QPCTQ16769 361 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 ECHDC2Q86YB7 292 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 SENP8Q96LD8 212 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 GAD1Q99259 594 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 CRTAC1Q9NQ79 661 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 KLHL11Q9NVR0 708 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 SRRM3A6NNA2 597 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-204ENST00000440400 CKBP12277 381 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 NPR3P17342 541 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 SCTRP47872 440 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 CDK7P50613 346 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 CLCNKBP51801 687 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 DPYSL2Q16555 572 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 ANKRD20A8PQ5CZ79 823 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 FAM47CQ5HY64 1035 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 SLC2A14Q8TDB8 520 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 ZNF670Q9BS34 389 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 B3GNT5Q9BYG0 378 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 ADAM33Q9BZ11 813 aa13.74□□□□□ -0.21
ACTN4-204ENST00000440400 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
ACTN4-204ENST00000440400 LRRD1A4D1F6 860 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 DNALI1O14645 258 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-204ENST00000440400 RIPK2O43353 540 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 ANP32DO95626 131 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 EOMESO95936 686 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 COL6A1P12109 1028 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 IGFBP6P24592 240 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-204ENST00000440400 AFF1P51825 1210 aaKnown RBP13.73□□□□□ -0.21
ACTN4-204ENST00000440400 USP4Q13107 963 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 MBTPS1Q14703 1052 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 KCTD19Q17RG1 926 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-204ENST00000440400 TBC1D25Q3MII6 688 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 WSCD1Q658N2 575 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 CEP128Q6ZU80 1094 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 CROCCP2Q86T23 111 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 ZCCHC9Q8N567 271 aaKnown RBP13.73□□□□□ -0.21
ACTN4-204ENST00000440400 MAB21L3Q8N8X9 362 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 TRMT13Q9NUP7 481 aaKnown RBP13.73□□□□□ -0.21
ACTN4-204ENST00000440400 PTPN22Q9Y2R2 807 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 USP3Q9Y6I4 520 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 A6NNZ2 444 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 ATP6V1G2O95670 118 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 ATF2P15336 505 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 TUBB8Q3ZCM7 444 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 EFHC1Q5JVL4 640 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 SH3PXD2AQ5TCZ1 1133 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 C6orf89Q6UWU4 347 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 CLEC20AQ6ZU45 233 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 PGM2Q96G03 612 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 A0A1W2PQ45 241 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-204ENST00000440400 A0A1W2PQY0 241 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 FAM107AO95990 144 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 CD48P09326 243 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 CTSHP09668 335 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 TGM2P21980 687 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 ITGA8P53708 1063 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 DSC1Q08554 894 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 NOMO1Q15155 1222 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 TAF5Q15542 800 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 MFSD5Q6N075 450 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 BHLHA9Q7RTU4 235 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 LINC01599Q8WXQ3 324 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 PGAP3Q96FM1 320 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-204ENST00000440400 CFAP57Q96MR6 1250 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 TRIM31Q9BZY9 425 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 RNF19AQ9NV58 838 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 RCOR3Q9P2K3 495 aaPredicted RBP13.73□□□□□ -0.21
ACTN4-204ENST00000440400 DSEQ9UL01 958 aa13.73□□□□□ -0.21
ACTN4-204ENST00000440400 ABHD2P08910 425 aa13.72□□□□□ -0.21
ACTN4-204ENST00000440400 TYMPP19971 482 aa13.72□□□□□ -0.21
ACTN4-204ENST00000440400 MDH1P40925 334 aaKnown RBP13.72□□□□□ -0.21
ACTN4-204ENST00000440400 RGS7P49802 495 aa13.72□□□□□ -0.21
ACTN4-204ENST00000440400 C15orf59Q2T9L4 293 aaPredicted RBP13.72□□□□□ -0.21
ACTN4-204ENST00000440400 RAB6CQ53S08 254 aa13.72□□□□□ -0.21
ACTN4-204ENST00000440400 RNASEH2BQ5TBB1 312 aaKnown RBP13.72□□□□□ -0.21
ACTN4-204ENST00000440400 BEND5Q7L4P6 421 aa13.72□□□□□ -0.21
ACTN4-204ENST00000440400 LPPQ93052 612 aa13.72□□□□□ -0.21
ACTN4-204ENST00000440400 RNF157Q96PX1 679 aa13.72□□□□□ -0.21
ACTN4-204ENST00000440400 RAB6CQ9H0N0 254 aa13.72□□□□□ -0.21
ACTN4-204ENST00000440400 ZWILCHQ9H900 591 aa13.72□□□□□ -0.21
ACTN4-204ENST00000440400 PNPLA8Q9NP80 782 aa13.72□□□□□ -0.21
ACTN4-204ENST00000440400 SF3B1O75533 1304 aaKnown RBP eCLIP13.72□□□□□ -0.213e-6■■■■□ 23.1
ACTN4-204ENST00000440400 SMAPO00193 183 aa13.72□□□□□ -0.21
ACTN4-204ENST00000440400 FBXO21O94952 628 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms