RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 HOMER3Q9NSC5 361 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 GOLGA6CA6NDK9 693 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 GOLGA6DP0CG33 693 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 LMAN1P49257 510 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 ATP1A2P50993 1020 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 KLF1Q13351 362 aaPredicted RBP15.7■□□□□ 0.1
CPSF7-205ENST00000439958 MGAT5BQ3V5L5 792 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 SNF8Q96H20 258 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 TMEM161AQ9NX61 479 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 GOLGA6AQ9NYA3 693 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 THSD7BQ9C0I4 1608 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 ZBBXA8MT70 800 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 ZBED1O96006 694 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 RPL17P18621 184 aaKnown RBP15.69■□□□□ 0.1
CPSF7-205ENST00000439958 ECHS1P30084 290 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 ARL4AP40617 200 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 GPR15P49685 360 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 BOLA3Q53S33 107 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
CPSF7-205ENST00000439958 POLNQ7Z5Q5 900 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 CCNYQ8ND76 341 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 KHSRPQ92945 711 aaKnown RBP eCLIP15.69■□□□□ 0.14e-8■■□□□ 14
CPSF7-205ENST00000439958 DMAP1Q9NPF5 467 aaPredicted RBP15.69■□□□□ 0.1
CPSF7-205ENST00000439958 SAGE1Q9NXZ1 904 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 DNAJB2P25686 324 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 DENND2CQ68D51 928 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 ARL8AQ96BM9 186 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 C9orf72Q96LT7 481 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 RTP3Q9BQQ7 232 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 CEP41Q9BYV8 373 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 GPR62Q9BZJ7 368 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 SEMA4AQ9H3S1 761 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 NRDE2Q9H7Z3 1164 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.69■□□□□ 0.1
CPSF7-205ENST00000439958 LCMT1Q9UIC8 334 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 MYO9BQ13459 2157 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 ERICH4A6NGS2 130 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 ACRP10323 421 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 AMPD1P23109 780 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 MATKP42679 507 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 GDF10P55107 478 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 TMC3Q7Z5M5 1100 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 ZMIZ2Q8NF64 920 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 CAVIN3Q969G5 261 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 PAK6Q9NQU5 681 aaPredicted RBP15.69■□□□□ 0.1
CPSF7-205ENST00000439958 KANSL3Q9P2N6 904 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 DSEQ9UL01 958 aa15.69■□□□□ 0.1
CPSF7-205ENST00000439958 SRGAP2BP0DMP2 458 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 GOT1P17174 413 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 PCK1P35558 622 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 ALDH7A1P49419 539 aaKnown RBP15.68■□□□□ 0.1
CPSF7-205ENST00000439958 PMS2P54278 862 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 DPYSL3Q14195 570 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 TCTN1Q2MV58 587 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 VARS2Q5ST30 1063 aaKnown RBP15.68■□□□□ 0.1
CPSF7-205ENST00000439958 ERMARDQ5T6L9 678 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 ZDHHC17Q8IUH5 632 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 STK32AQ8WU08 396 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 RUNDC3BQ96NL0 473 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 POPDC2Q9HBU9 364 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 TTLL3Q9Y4R7 772 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 SNX10Q9Y5X0 201 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 APOL1O14791 398 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 KCNN4O15554 427 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 OPA1O60313 960 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 CHKAP35790 457 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 VCPP55072 806 aaKnown RBP15.68■□□□□ 0.1
CPSF7-205ENST00000439958 UBAP2Q5T6F2 1119 aaKnown RBP15.68■□□□□ 0.1
CPSF7-205ENST00000439958 SLC39A5Q6ZMH5 540 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 TMEM173Q86WV6 379 aaPredicted RBP15.68■□□□□ 0.1
CPSF7-205ENST00000439958 TTC9BQ8N6N2 239 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 RUBCNQ92622 972 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 ACBD6Q9BR61 282 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 PCDH18Q9HCL0 1135 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 GRHL1Q9NZI5 618 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 ADAM28Q9UKQ2 775 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 CAND2O75155 1236 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 LTFP02788 710 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 ADCY1Q08828 1119 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 TFDP2Q14188 446 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 RWDD4Q6NW29 188 aaKnown RBP15.68■□□□□ 0.1
CPSF7-205ENST00000439958 PRSS55Q6UWB4 352 aaPredicted RBP15.68■□□□□ 0.1
CPSF7-205ENST00000439958 ZNF771Q7L3S4 317 aaPredicted RBP15.68■□□□□ 0.1
CPSF7-205ENST00000439958 SUSD3Q96L08 255 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 FAM124BQ9H5Z6 455 aaPredicted RBP15.68■□□□□ 0.1
CPSF7-205ENST00000439958 MFHAS1Q9Y4C4 1052 aa15.68■□□□□ 0.1
CPSF7-205ENST00000439958 ROR1Q01973 937 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 CYP1B1Q16678 543 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 BSPRYQ5W0U4 402 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 COLGALT2Q8IYK4 626 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 UROC1Q96N76 676 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 DDX23Q9BUQ8 820 aaKnown RBP15.67■□□□□ 0.1
CPSF7-205ENST00000439958 MSI1O43347 362 aaKnown RBP15.67■□□□□ 0.1
CPSF7-205ENST00000439958 HMBSP08397 361 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 SLC11A1P49279 550 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 CDK7P50613 346 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 COPS2P61201 443 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 LMNB2Q03252 620 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 FAAP100Q0VG06 881 aa15.67■□□□□ 0.1
CPSF7-205ENST00000439958 SLC29A2Q14542 456 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms