RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 SH3RF2Q8TEC5 729 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 IPO4Q8TEX9 1081 aaKnown RBP16.94■□□□□ 0.3
SNRPB-202ENST00000438552 DEPDC1BQ8WUY9 529 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 CPA5Q8WXQ8 436 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 IRGQQ8WZA9 623 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 EDEM1Q92611 657 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 E2F7Q96AV8 911 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 ZFRQ96KR1 1074 aaKnown RBP16.94■□□□□ 0.3
SNRPB-202ENST00000438552 PCDHB18PQ96TA0 734 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 AGPAT1Q99943 283 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 SYNCQ9H7C4 482 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 OBP2AQ9NY56 170 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 CLIC5Q9NZA1 410 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 AIPL1Q9NZN9 384 aa16.94■□□□□ 0.3
SNRPB-202ENST00000438552 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNRPB-202ENST00000438552 LEFTY2O00292 366 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 SCAMP3O14828 347 aaKnown RBP16.93■□□□□ 0.3
SNRPB-202ENST00000438552 CYP1A1P04798 512 aaPredicted RBP16.93■□□□□ 0.3
SNRPB-202ENST00000438552 IRF1P10914 325 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 SRFP11831 508 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 PSMC3P17980 439 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 GDI1P31150 447 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 ATP5C1P36542 298 aaKnown RBP16.93■□□□□ 0.3
SNRPB-202ENST00000438552 ZNF75DP51815 510 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 TRIM14Q14142 442 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 C2CD6Q53TS8 623 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 BSPRYQ5W0U4 402 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 BTBD8Q5XKL5 378 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 TRIM72Q6ZMU5 477 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 RSRC2Q7L4I2 434 aaKnown RBP16.93■□□□□ 0.3
SNRPB-202ENST00000438552 TMC6Q7Z403 805 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 YAF2Q8IY57 180 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 FAM149B1Q96BN6 582 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 ASIC4Q96FT7 647 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 ZFYVE19Q96K21 471 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 SYT11Q9BT88 431 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 TRMT61BQ9BVS5 477 aaKnown RBP16.93■□□□□ 0.3
SNRPB-202ENST00000438552 HAUS4Q9H6D7 363 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 RASAL2Q9UJF2 1139 aa16.93■□□□□ 0.3
SNRPB-202ENST00000438552 LUC7L2Q9Y383 392 aaKnown RBP16.93■□□□□ 0.3
SNRPB-202ENST00000438552 SART1O43290 800 aaKnown RBP16.92■□□□□ 0.3
SNRPB-202ENST00000438552 SKILP12757 684 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 PRKCIP41743 596 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 GPC5P78333 572 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 ZXDAP98168 799 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 GOLGA8FQ08AF8 430 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 GOLGA8DPQ0D2H9 430 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 KLHL30Q0D2K2 578 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 FCHO2Q0JRZ9 810 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 EFEMP1Q12805 493 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 MTF1Q14872 753 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 CLEC16AQ2KHT3 1053 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 OR6B2Q6IFH4 312 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 OLFML1Q6UWY5 402 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 ZNF571Q7Z3V5 609 aaPredicted RBP16.92■□□□□ 0.3
SNRPB-202ENST00000438552 TADA2BQ86TJ2 420 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 ERICH1Q86X53 443 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 MIB1Q86YT6 1006 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 SLC30A5Q8TAD4 765 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 GOLGA1Q92805 767 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 NUCKS1Q9H1E3 243 aaKnown RBP16.92■□□□□ 0.3
SNRPB-202ENST00000438552 GKN1Q9NS71 199 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 CFAP97Q9P2B7 532 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 DNMT3LQ9UJW3 386 aa16.92■□□□□ 0.3
SNRPB-202ENST00000438552 UNGP13051 313 aaPredicted RBP16.91■□□□□ 0.3
SNRPB-202ENST00000438552 TCF3P15923 654 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 TAF5Q15542 800 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 TDRD12Q587J7 1177 aaKnown RBP16.91■□□□□ 0.3
SNRPB-202ENST00000438552 KLHDC10Q6PID8 442 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 MMS22LQ6ZRQ5 1243 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 UBALD2Q8IYN6 164 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 MSANTD4Q8NCY6 345 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 RNF139Q8WU17 664 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 WBP2Q969T9 261 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 CDK5RAP1Q96SZ6 601 aaKnown RBP16.91■□□□□ 0.3
SNRPB-202ENST00000438552 C11orf70Q9BRQ4 267 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 KLF16Q9BXK1 252 aaPredicted RBP16.91■□□□□ 0.3
SNRPB-202ENST00000438552 BRD9Q9H8M2 597 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 SLC2A4RGQ9NR83 387 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 ABCC13Q9NSE7 274 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 WNT6Q9Y6F9 365 aa16.91■□□□□ 0.3
SNRPB-202ENST00000438552 ZNF263O14978 683 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 MFAP3LO75121 409 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 GRAP2O75791 330 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 FYNP06241 537 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 TPM1P09493 284 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 TNFAIP3P21580 790 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 NSFP46459 744 aaKnown RBP16.9■□□□□ 0.3
SNRPB-202ENST00000438552 GABRB2P47870 512 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 SNX16P57768 344 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 CENPCQ03188 943 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 ARHGAP29Q52LW3 1261 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 HGSNATQ68CP4 663 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 TRIM68Q6AZZ1 485 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 MSANTD2Q6P1R3 559 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 TOGARAM2Q6ZUX3 1019 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 DDX42Q86XP3 938 aaKnown RBP eCLIP16.9■□□□□ 0.3
SNRPB-202ENST00000438552 XYLT1Q86Y38 959 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 ZNF276Q8N554 614 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 SYN2Q92777 582 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms