RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 AP4E1Q9UPM8 1137 aa17.48■□□□□ 0.39
GSE1-206ENST00000438180 PTPRDP23468 1912 aa17.48■□□□□ 0.39
GSE1-206ENST00000438180 TTC3P53804 2025 aa17.48■□□□□ 0.39
GSE1-206ENST00000438180 HHLA1C9JL84 531 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 AGPSO00116 658 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 SGK1O00141 431 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 APOL1O14791 398 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 SYF2O95926 243 aaKnown RBP17.47■□□□□ 0.39
GSE1-206ENST00000438180 BDNFP23560 247 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 KLRC2P26717 231 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 NDUFV1P49821 464 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 ATN1P54259 1190 aaPredicted RBP17.47■□□□□ 0.39
GSE1-206ENST00000438180 PMS2P54278 862 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 EIF3BP55884 814 aaKnown RBP17.47■□□□□ 0.39
GSE1-206ENST00000438180 GABPB1Q06547 395 aaPredicted RBP17.47■□□□□ 0.39
GSE1-206ENST00000438180 NFE2Q16621 373 aaPredicted RBP17.47■□□□□ 0.39
GSE1-206ENST00000438180 CASD1Q96PB1 797 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 KCNK16Q96T55 309 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 SLC9A7Q96T83 725 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 NPY6RQ99463 290 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 TMEM175Q9BSA9 504 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 TXLNGYQ9BZA5 131 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 ADAM28Q9UKQ2 775 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 PLAAQ9Y263 795 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 ATP8A1Q9Y2Q0 1164 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 PRG3Q9Y2Y8 225 aaPredicted RBP17.47■□□□□ 0.39
GSE1-206ENST00000438180 PATJQ8NI35 1801 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 B4GALT3O60512 393 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 RNF40O75150 1001 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 LTFP02788 710 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 ALDH2P05091 517 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 IVDP26440 423 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 EIF3EP60228 445 aaKnown RBP17.47■□□□□ 0.39
GSE1-206ENST00000438180 ANKRD20A8PQ5CZ79 823 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 RSAD2Q8WXG1 361 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 FAF2Q96CS3 445 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 FUBP3Q96I24 572 aaKnown RBP eCLIP17.47■□□□□ 0.39
GSE1-206ENST00000438180 NRDE2Q9H7Z3 1164 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 DNAJB4Q9UDY4 337 aa17.47■□□□□ 0.39
GSE1-206ENST00000438180 SF3B1O75533 1304 aaKnown RBP eCLIP17.46■□□□□ 0.394e-10■■■■■ 40.1
GSE1-206ENST00000438180 NLRC5Q86WI3 1866 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 M0QYT0 321 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 POLR3GO15318 223 aaPredicted RBP17.46■□□□□ 0.39
GSE1-206ENST00000438180 F9P00740 461 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 RARGP13631 454 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 ARL4AP40617 200 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 ITGA8P53708 1063 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 DEUP1Q05D60 604 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 FAAP100Q0VG06 881 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 NOMO1Q15155 1222 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 TRIP13Q15645 432 aaPredicted RBP17.46■□□□□ 0.39
GSE1-206ENST00000438180 RAB6CQ53S08 254 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 ZC3H12AQ5D1E8 599 aaKnown RBP17.46■□□□□ 0.39
GSE1-206ENST00000438180 IZUMO3Q5VZ72 239 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 PM20D1Q6GTS8 502 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 BEND5Q7L4P6 421 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 BNIPLQ7Z465 357 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 PCGF5Q86SE9 256 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 ANKLE1Q8NAG6 615 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 PGAP3Q96FM1 320 aaPredicted RBP17.46■□□□□ 0.39
GSE1-206ENST00000438180 OXCT2Q9BYC2 517 aaPredicted RBP17.46■□□□□ 0.39
GSE1-206ENST00000438180 ZCWPW1Q9H0M4 648 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 RAB6CQ9H0N0 254 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 PABPC3Q9H361 631 aaKnown RBP17.46■□□□□ 0.39
GSE1-206ENST00000438180 DHX35Q9H5Z1 703 aaKnown RBP17.46■□□□□ 0.39
GSE1-206ENST00000438180 TMEM51Q9NW97 253 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 FAN1Q9Y2M0 1017 aa17.46■□□□□ 0.39
GSE1-206ENST00000438180 CFAP69A5D8W1 941 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 OR6C75A6NL08 312 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 F8W810 466 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 NRP1O14786 923 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 USP17L7P0C7H9 530 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 TFE3P19532 575 aaPredicted RBP17.45■□□□□ 0.38
GSE1-206ENST00000438180 STIP1P31948 543 aaKnown RBP17.45■□□□□ 0.38
GSE1-206ENST00000438180 L1CAMP32004 1257 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 RFC2P35250 354 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 CACNA2D1P54289 1103 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 BCAR1P56945 870 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 ROR1Q01973 937 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 TLE2Q04725 743 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 MMRN1Q13201 1228 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 UAP1Q16222 522 aaPredicted RBP17.45■□□□□ 0.38
GSE1-206ENST00000438180 TRIM60Q495X7 471 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 PPP6R3Q5H9R7 873 aaPredicted RBP17.45■□□□□ 0.38
GSE1-206ENST00000438180 DENND2CQ68D51 928 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 SLC9A4Q6AI14 798 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 ZNF280DQ6N043 979 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 TRMT10CQ7L0Y3 403 aaKnown RBP17.45■□□□□ 0.38
GSE1-206ENST00000438180 GPRIN1Q7Z2K8 1008 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 CROCCP2Q86T23 111 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 LRRC43Q8N309 656 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 PIK3R5Q8WYR1 880 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 SCLYQ96I15 445 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 TMEM121Q9BTD3 319 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 TMLHEQ9NVH6 421 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 GPATCH2LQ9NWQ4 482 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 VPS18Q9P253 973 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 FZD10Q9ULW2 581 aa17.45■□□□□ 0.38
GSE1-206ENST00000438180 YJEFN3A6XGL0 299 aa17.44■□□□□ 0.38
GSE1-206ENST00000438180 E7ENQ6 273 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms