RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 GTF2H1P32780 548 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 SKIV2L2P42285 1042 aaKnown RBP11.87□□□□□ -0.51
PTCH1-209ENST00000437951 TGM3Q08188 693 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF394Q53GI3 561 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 DENND5AQ6IQ26 1287 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 PROX1Q92786 737 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 FEM1BQ9UK73 627 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 MATN2O00339 956 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 NR5A2O00482 541 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 RHOBTB3O94955 611 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 APOC1P02654 83 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 RPS6KA3P51812 740 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 YWHAZP63104 245 aaKnown RBP11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ARHGEF7Q14155 803 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 MROH9Q5TGP6 573 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 TTC23Q5W5X9 447 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 FAM228AQ86W67 206 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 TPCN2Q8NHX9 752 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ATP7BP35670 1465 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 MGRN1O60291 552 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 GSTM1P09488 218 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 TGM2P21980 687 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 MUTP22033 750 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 AP3S2P59780 193 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 PSMC5P62195 406 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 PACS2Q86VP3 889 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 DEPDC4Q8N2C3 294 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 TC2NQ8N9U0 490 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 MKNK1Q9BUB5 465 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 SYNDIG1Q9H7V2 258 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 PCDHB2Q9Y5E7 798 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 EYA4O95677 639 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ATP6V1C1P21283 382 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 MTF1Q14872 753 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 VPS72Q15906 364 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 TMEM179Q6ZVK1 233 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
PTCH1-209ENST00000437951 FAM120BQ96EK7 910 aaKnown RBP11.87□□□□□ -0.51
PTCH1-209ENST00000437951 COX4I2Q96KJ9 171 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 GRIP2Q9C0E4 1043 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 DSN1Q9H410 356 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 WDR37Q9Y2I8 494 aa11.87□□□□□ -0.51
PTCH1-209ENST00000437951 ANKS6Q68DC2 871 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 ATG14Q6ZNE5 492 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 TMEM132CQ8N3T6 1108 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 POC5Q8NA72 575 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF398Q8TD17 642 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 MCEEQ96PE7 176 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 GALNT8Q9NY28 637 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 KCNK4Q9NYG8 393 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 KDM5CP41229 1560 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 CCDC154A6NI56 674 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 C2orf81A6NN90 581 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 GP5P40197 560 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 ESRP1Q6NXG1 681 aaKnown RBP11.86□□□□□ -0.51
PTCH1-209ENST00000437951 SGF29Q96ES7 293 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 DPYDQ12882 1025 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 PDK2Q15119 407 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 PAPD7Q5XG87 772 aaKnown RBP11.86□□□□□ -0.51
PTCH1-209ENST00000437951 PLA2G4FQ68DD2 849 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 SLC26A11Q86WA9 606 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 C2orf69Q8N8R5 385 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 MTIF3Q9H2K0 278 aaKnown RBP11.86□□□□□ -0.51
PTCH1-209ENST00000437951 ATPIF1Q9UII2 106 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 PCDHGA3Q9Y5H0 932 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 CAPGP40121 348 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 KCNV1Q6PIU1 500 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 KCNB2Q92953 911 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 RHOBTB2Q9BYZ6 727 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 PRELID1Q9Y255 219 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 DHFRP00374 187 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 TFDP3Q5H9I0 405 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 C10orf53Q8N6V4 93 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF671Q8TAW3 534 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 GIPC3Q8TF64 312 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 STN1Q9H668 368 aaKnown RBP11.86□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF302Q9NR11 478 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 PTPRTO14522 1441 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 CYP26A1O43174 497 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 FOSL2P15408 326 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 GSTM5P46439 218 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 VEPH1Q14D04 833 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 SLC13A5Q86YT5 568 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-209ENST00000437951 SCN4BQ8IWT1 228 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 ERGIC2Q96RQ1 377 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 MLXQ9UH92 298 aa11.86□□□□□ -0.51
PTCH1-209ENST00000437951 ADGRL3Q9HAR2 1447 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 VPS26AO75436 327 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 RECQL5O94762 991 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF24P17028 368 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 ACAT1P24752 427 aaKnown RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 GCLCP48506 637 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 ELF3P78545 371 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 ENPEPQ07075 957 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 TXNRD1Q16881 649 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 FUKQ8N0W3 1084 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 TMEM117Q9H0C3 514 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 KLHL1Q9NR64 748 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 MGAT4AQ9UM21 535 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms