RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 XPNPEP3Q9NQH7 507 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 DNMT3BQ9UBC3 853 aaKnown RBP3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 ANKRD6Q9Y2G4 727 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 LOC102723971A0A1B0GUV8 181 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 C2CD4BA6NLJ0 364 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 C4orf47A7E2U8 309 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 H3BML4 177 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 FOXN3O00409 490 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 FYB1O15117 783 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 PHGDHO43175 533 aaKnown RBP3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 CCP110O43303 1012 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 KRT86O43790 486 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 UBXN7O94888 489 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 HGFP14210 728 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 CD19P15391 556 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 EN2P19622 333 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 MT3P25713 68 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 IL6STP40189 918 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 PGDP52209 483 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 TXNL4AP83876 142 aaKnown RBP3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 KRT81Q14533 505 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 KPNB1Q14974 876 aaKnown RBP3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 FAM110CQ1W6H9 321 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 PRTGQ2VWP7 1150 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 ZDHHC24Q6UX98 284 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 KCTD20Q7Z5Y7 419 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 PNPLA1Q8N8W4 532 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 TMEM204Q9BSN7 226 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 AASDHPPTQ9NRN7 309 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 HOMER2Q9NSB8 354 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 ARL8BQ9NVJ2 186 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 TMEM45AQ9NWC5 275 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 GABBR1Q9UBS5 961 aa3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 TTBK1Q5TCY1 1321 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P31-201ENST00000437242 ANKRD62A6NC57 917 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 MBD3L4A6NDZ8 208 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 MBD3L3A6NE82 208 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 CYSRT1A8MQ03 144 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 A8MVJ9 347 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 H7C4K7 107 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 RRP9O43818 475 aaKnown RBP3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 MARCH6O60337 910 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 PIAS2O75928 621 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 PLAUP00749 431 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 ADRA1DP25100 572 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 PTDSS1P48651 473 aaKnown RBP3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 GATMP50440 423 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 NEK2P51955 445 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 ITGA8P53708 1063 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 ZXDBP98169 803 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 ST3GAL2Q16842 350 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 BRDTQ58F21 947 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 B4GALNT4Q76KP1 1039 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 CHPFQ8IZ52 775 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 DCP1BQ8IZD4 617 aaKnown RBP3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 ZBTB8BQ8NAP8 495 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 OR56A3Q8NH54 315 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 TRMT61AQ96FX7 289 aaKnown RBP3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 VPS50Q96JG6 964 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 BRINP2Q9C0B6 783 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 NUAK2Q9H093 628 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 TMEM8AQ9HCN3 771 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 NMRK2Q9NPI5 230 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 TXLNGQ9NUQ3 528 aa3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 NKX1-2Q9UD57 310 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P31-201ENST00000437242 CTIFO43310 598 aaKnown RBP3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 USP12O75317 370 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 RASSF9O75901 435 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 KLRC1P26715 233 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 SLC7A1P30825 629 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 ALDH7A1P49419 539 aaKnown RBP3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 GPC5P78333 572 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 DEUP1Q05D60 604 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 KRTAP27-1Q3LI81 207 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 RFX8Q6ZV50 586 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 FAM57BQ71RH2 274 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 B4GALNT2Q8NHY0 566 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 PPP1R35Q8TAP8 253 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 WIPF2Q8TF74 440 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 MAML1Q92585 1016 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 HOOK2Q96ED9 719 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 KAZALD1Q96I82 304 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 ZNF479Q96JC4 524 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 TM2D2Q9BX73 214 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 DECR2Q9NUI1 292 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 HDAC9Q9UKV0 1011 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 ASAP1Q9ULH1 1129 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 RIMKLBQ9ULI2 386 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 FZD4Q9ULV1 537 aa3.9□□□□□ -1.79
HMGB1P31-201ENST00000437242 F8W810 466 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 SLC28A2O43868 658 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 NGFRP08138 427 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 PARP1P09874 1014 aaKnown RBP3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 HSPA6P17066 643 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 STK3Q13188 491 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 ASIC2Q16515 512 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 ZNF628Q5EBL2 1059 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 EARS2Q5JPH6 523 aaKnown RBP3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 USP43Q70EL4 1123 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 C11orf44Q8N8P7 122 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms