RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 GUCA1BQ9UMX6 200 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 PCDHA11Q9Y5I1 949 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 KCNMB2Q9Y691 235 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 CDY1Q9Y6F8 540 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 NCANO14594 1321 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 KIAA0100Q14667 2235 aaKnown RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 A0A0A6YYK5 440 aaPredicted RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 MACROD2A1Z1Q3 448 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 E5RJQ4 531 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 C5orf67F2Z3F1 127 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 PIK3R2O00459 728 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 C2CD2LO14523 706 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 XPO1O14980 1071 aaKnown RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 FANCGO15287 622 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 BUB1O43683 1085 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 KRT86O43790 486 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 MTA2O94776 668 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 GJB6O95452 261 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 CALB1P05937 261 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 FAM200BP0CF97 657 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 MYBL1P10243 752 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 CTSAP10619 480 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 BMP2P12643 396 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 CYP2F1P24903 491 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 DNAJB1P25685 340 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 BMP8BP34820 402 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 OR1D2P34982 312 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 CTNNB1P35222 781 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 ST13P50502 369 aaKnown RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 ARPP19P56211 112 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 MAP3K7CLP57077 242 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 ROR1Q01973 937 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 TAP1Q03518 808 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 MAMLD1Q13495 774 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 ZNF268Q14587 947 aaPredicted RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 TRIP4Q15650 581 aaPredicted RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 PTPN14Q15678 1187 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 PSMD5Q16401 504 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 NFE2Q16621 373 aaPredicted RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 CFAP221Q4G0U5 840 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 PLEKHA7Q6IQ23 1121 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 GPRIN1Q7Z2K8 1008 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 XYLT1Q86Y38 959 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 SPATA2LQ8IUW3 424 aaPredicted RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 GPR65Q8IYL9 337 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 TXLNBQ8N3L3 684 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 RNF10Q8N5U6 811 aaKnown RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 TTC9BQ8N6N2 239 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 ATAD1Q8NBU5 361 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 SPPL3Q8TCT6 385 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 CTNNBL1Q8WYA6 563 aaPredicted RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 KCTD13Q8WZ19 329 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 RFFLQ8WZ73 363 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 PMEPA1Q969W9 287 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 C18orf8Q96DM3 657 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 MCRS1Q96EZ8 462 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 TRIM11Q96F44 468 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 SMARCD1Q96GM5 515 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 HSFY1Q96LI6 401 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 PGLYRP2Q96PD5 576 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 NOX5Q96PH1 765 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 PLVAPQ9BX97 442 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 PBX4Q9BYU1 374 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 CRISPLD1Q9H336 500 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 RXFP1Q9HBX9 757 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 CAPN10Q9HC96 672 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 ALG13Q9NP73 1137 aaKnown RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 OSGEPQ9NPF4 335 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 TIMMDC1Q9NPL8 285 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 AVENQ9NQS1 362 aaPredicted RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 MRPL17Q9NRX2 175 aaKnown RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 ABI2Q9NYB9 513 aaPredicted RBP7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 STK39Q9UEW8 545 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 LZTS1Q9Y250 596 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 PCDHB5Q9Y5E4 795 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 CAPN6Q9Y6Q1 641 aa7.4□□□□□ -1.22
LSM3P3-201ENST00000436601 PDCD11Q14690 1871 aaKnown RBP7.4□□□□□ -1.23
LSM3P3-201ENST00000436601 MICAL3Q7RTP6 2002 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 WDR27A2RRH5 827 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 GRID2IPA4D2P6 1211 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 MTMR11A4FU01 709 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 TMEM191CA6NGB0 347 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 GRM6O15303 877 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 TEX28O15482 410 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 PAPSS1O43252 624 aaPredicted RBP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 ABLIM3O94929 683 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 CXCL14O95715 111 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 URODP06132 367 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 RB1P06400 928 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 CNPP09543 421 aaKnown RBP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 HAPLN1P10915 354 aaPredicted RBP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 LCP1P13796 627 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 CPB1P15086 417 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 MSX1P28360 303 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 MAGEA11P43364 429 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 NOP2P46087 812 aaKnown RBP7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 GPR15P49685 360 aa7.39□□□□□ -1.23
LSM3P3-201ENST00000436601 NDUFV1P49821 464 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms